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BaseInfo

ncRNA ID novel_gar_miR658
Species Gossypium arboreum
Class miRNA
Genome position Chr1:54249791-54249935 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 122 - CACGGGCUGAGGACACAGACGUGU - 145
Stem-loop(if miRNA) --   GG     G  -   G        -AG    - ---A    AUUUUA   -- UUAAUUCACCACACGGGCGUGUU
  AUG  UGUGU CC CAG CCGUGUGA   UCUG C    CCUG      GAA  U                       A
  |||  ||||| || ||| ||||||||   |||| |    ||||      |||  |
  UGC  ACACA GG GUC GGCACAUU   AGAC G    UACA      GUA  U                       U
UG   AG     -  A   G        GAG    U AUAU    ------   GU GGUUUUAUUCCAGUGUACCGGUU
Stem-loop sequence AUGGGUGUGUGCCCAGGCCGUGUGAAGUCUGCACCUGAUUUUAGAAUUUAAUUCACCACACGGGCGUGUUAUUUGGCCAUGUGACCUUAUUUUGGUUGAUGACAUUAUAGUCAGAGAGUUACACGGGCUGAGGACACAGACGUGU