ncRNA ID | novel_gar_miR658 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:54249791-54249935 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 122 - CACGGGCUGAGGACACAGACGUGU - 145 |
Stem-loop(if miRNA) |
--   GG     G  -   G        -AG    - ---A    AUUUUA   -- UUAAUUCACCACACGGGCGUGUU   AUG  UGUGU CC CAG CCGUGUGA   UCUG C    CCUG      GAA  U                       A   |||  ||||| || ||| ||||||||   |||| |    ||||      |||  |   UGC  ACACA GG GUC GGCACAUU   AGAC G    UACA      GUA  U                       U UG   AG     -  A   G        GAG    U AUAU    ------   GU GGUUUUAUUCCAGUGUACCGGUU |
Stem-loop sequence | AUGGGUGUGUGCCCAGGCCGUGUGAAGUCUGCACCUGAUUUUAGAAUUUAAUUCACCACACGGGCGUGUUAUUUGGCCAUGUGACCUUAUUUUGGUUGAUGACAUUAUAGUCAGAGAGUUACACGGGCUGAGGACACAGACGUGU |