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BaseInfo

ncRNA ID novel_gar_miR657
Species Gossypium arboreum
Class miRNA
Genome position Chr1:52655433-52655592 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 24
Mature sequence(if miRNA) 137 - UUUGGACUACCACGUAGGACUGCC - 160
Stem-loop(if miRNA) --           A CAA                   C    AUA      C  U  G  -AGUCCA    AAAAUCUUUU
  CGGUCCUACGU G   UCCAAAUGGGUUUUAAAUG CAAC   GAUGUC UA GU GC       AAUU          A
  ||||||||||| |   ||||||||||||||||||| ||||   |||||| || || ||       ||||          A
  GUCAGGAUGCA C   AGGUUUACCUAAAAUUUAC GUUG   CUACAG AU CA CG       UUUU          U
CC           C AUC                   A    AAC      -  -  A  ACCUUAC    AUACAAAAAU
Stem-loop sequence CGGUCCUACGUAGCAAUCCAAAUGGGUUUUAAAUGCCAACAUAGAUGUCCUAUGUGGCAGUCCAAAUUAAAAUCUUUUAAUUAAAAACAUAUUUUCAUUCCAGCAACUAGACAUCCAAGUUGACAUUUAAAAUCCAUUUGGACUACCACGUAGGACUGCC