ncRNA ID | novel_gar_miR655 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:47736172-47736283 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 89 - AUUGUUGGUCUGACGGUCAAACUG - 112 |
Stem-loop(if miRNA) |
--   CA       A           A    UC     UAAAUAUAAAACCAGUUUU   GUU  ACCGUCA ACCAAUAAUAA UAAA  AAAAU                   G   |||  ||||||| ||||||||||| ||||  |||||   CAA  UGGCAGU UGGUUGUUAUU AUUU  UUAAA                   U GU   AC       C           A    --     UAUUUUUAAAUUUUUAGUU |
Stem-loop sequence | GUUCAACCGUCAAACCAAUAAUAAAUAAAUCAAAAUUAAAUAUAAAACCAGUUUUGUUUGAUUUUUAAAUUUUUAUAAAUUUUUAAUUAUUGUUGGUCUGACGGUCAAACUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017777616.1 |
|
3.0 | PREDICTED: Gossypium arboreum transcription factor MYB108 (LOC108475633), mRNA | transcription factor MYB108(LOC108475633) | coding protein | psRNATarget |