ncRNA ID | novel_gar_miR654 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:8243229-8243387 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 136 - GCUAAAGACCAGGACUUAUAGCGG - 159 |
Stem-loop(if miRNA) |
--    -   A  A  AC       A   CUUAUA       -    A   -   A  A  A   A           A   A   GCUA AAG CC GG  UUUUAGC GCG      UAAAAAA UGCC CUA AAG CC GG CUU UAGCGGCGCUU UAU A   |||| ||| || ||  ||||||| |||      ||||||| |||| ||| ||| || || ||| ||||||||||| ||| A   CGAU UUC GG CC  GAAAUCG CGC      AUUUUUU GCGG GAU UUC GG CC GAA AUCGCCGCGAA GUA A GG    A   A  A  -A       C   -AAAAA       C    C   A   A  A  A   -           A   A |
Stem-loop sequence | GCUAAAGACCAGGACUUUUAGCAGCGCUUAUAUAAAAAAUGCCACUAAAGACCAGGACUUAUAGCGGCGCUUAUAUAAAAAAUGAAAGCGCCGCUAAAGACCAGGACUUAUAGCGGCGCUUUUUUAAAAAACGCCGCUAAAGACCAGGACUUAUAGCGG |