ncRNA ID | ath_circ_028641 |
Species | Arabidopsis thaliana |
Class | circRNA |
Genome position | 5:20789827-20790118[+] |
Reference genome | TAIR10 |
Source | PlantcircBase |
Method | find_circ |
Type | exonic |
Splice junction sequence | AGTCTTAGCAGGTTCAGTTGCGGGTTTGTCTATCTTGGCTTTAGATGATTCCAACCAGCGTCGCACACTTGCTCTATACCTCTTGGCTAGATTAGGCCAGGGCGGCTTATAATTCCGCTAAGTCAAAGAACAAGTTCCATCTTTGGGGTAGCCATTGGAGACATGGAGATTCGTTACTTTTTTCTCTTGCATGTGCTCAG |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | AG-GT |
circRNA sequence | NA |
Genomic sequence | AGTCTTAGCAGGTTCAGTTGCGGGTTTGTCTATCTTGGCTTTAGATGATTCCAACCAGCGTCGCACACTTGCTCTATACCTCTTGGCTAGATTAGGCCAGGTACATCTAATGGTCATAGTATTGTCTGTCGTACAGAGTAATATCACCACACAGATGTTTTTTTCGGAGTCTGATTTTTTCTCTTATTAATAGGCGGCTTATAATTCCGCTAAGTCAAAGAACAAGTTCCATCTTTGGGGTAGCCATTGGAGACATGGAGATTCGTTACTTTTTTCTCTTGCATGTGCTCAG |