ncRNA ID | novel_gar_miR646 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:142095016-142095109 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 23 |
Mature sequence(if miRNA) | 72 - AGAAAGCUCUUGAAUGUUCGGUU - 94 |
Stem-loop(if miRNA) |
--    -     U     G     UUA   GGGGAAGAAAAUUGAAGG   AGAA AGCUC UGAAU UUCGG   CUU                  U   |||| ||||| ||||| |||||   |||                  A   UCUU UUGAG ACUUG GAGUU   AUU                  A GU    C     U     -     -UU   UUCGUUUGAUGGUACUUG |
Stem-loop sequence | AGAAAGCUCUUGAAUGUUCGGUUACUUGGGGAAGAAAAUUGAAGGUAAGUUCAUGGUAGUUUGCUUUUAUUUUGAGGUUCAUGAGUUCUUCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788392.1 |
|
3.0 | PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA | dolichol kinase EVAN-like(LOC108484565) | coding protein | psRNATarget |