ncRNA ID | novel_gar_miR644 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:49044338-49044520 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 160 - ACUAAUGUGUCACGUUGGCAAUCC - 183 |
Stem-loop(if miRNA) |
--     UG              CA                ---CA                                AACCUCCCUAUAAUU   AUUGU  AUGUGACACAUUAG  CAUUGAGUGAUUGACA     UAUUUUUUGUUGACUUUUGAUUAAAGUUUAGG               A   |||||  ||||||||||||||  ||||||||||||||||     ||||||||||||||||||||||||||||||||   UAACG  UGCACUGUGUAAUC  GUAACUCACUGAUUGU     GUAAAAAACAACUGAAAACUGAUUUCAAAUUC               G CC     GU              AA                ACACA                                CCUUUUUCAAAACUU |
Stem-loop sequence | AUUGUUGAUGUGACACAUUAGCACAUUGAGUGAUUGACACAUAUUUUUUGUUGACUUUUGAUUAAAGUUUAGGAACCUCCCUAUAAUUAGUUCAAAACUUUUUCCCUUAAACUUUAGUCAAAAGUCAACAAAAAAUGACACAUGUUAGUCACUCAAUGAACUAAUGUGUCACGUUGGCAAUCC |