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BaseInfo

ncRNA ID novel_gar_miR644
Species Gossypium arboreum
Class miRNA
Genome position Chr13:49044338-49044520 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 160 - ACUAAUGUGUCACGUUGGCAAUCC - 183
Stem-loop(if miRNA) --     UG              CA                ---CA                                AACCUCCCUAUAAUU
  AUUGU  AUGUGACACAUUAG  CAUUGAGUGAUUGACA     UAUUUUUUGUUGACUUUUGAUUAAAGUUUAGG               A
  |||||  ||||||||||||||  ||||||||||||||||     ||||||||||||||||||||||||||||||||
  UAACG  UGCACUGUGUAAUC  GUAACUCACUGAUUGU     GUAAAAAACAACUGAAAACUGAUUUCAAAUUC               G
CC     GU              AA                ACACA                                CCUUUUUCAAAACUU
Stem-loop sequence AUUGUUGAUGUGACACAUUAGCACAUUGAGUGAUUGACACAUAUUUUUUGUUGACUUUUGAUUAAAGUUUAGGAACCUCCCUAUAAUUAGUUCAAAACUUUUUCCCUUAAACUUUAGUCAAAAGUCAACAAAAAAUGACACAUGUUAGUCACUCAAUGAACUAAUGUGUCACGUUGGCAAUCC