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BaseInfo

ncRNA ID	novel_gar_miR643
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:632349-632426 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	55 - UCGGCUGCUCGUGACGCUGGGAAG - 78
Stem-loop(if miRNA)	--    --   C   UG   C     A  ACC    AA AA   UCGG  CUG UCG  ACG UGGGA GA   UGUC  G  A   ||||  ||| |||  ||| ||||| ||   ||||  |  U   GGCC  GAU AGU  UGC ACCCU CU   AUAG  C  A AG    AA   -   GU   -     A  -GA    AG AA
Stem-loop sequence	UCGGCUGCUCGUGACGCUGGGAAGAACCUGUCAAGAAAUAAACGAGAUAAGUCAUCCCACGUUGUGAUAGAACCGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017777239.1	ncRNA:24   GAAGGGUCGCAGUGCUCGUCGGCU   1   ||||||||||||||||||||||*| targets:540   CUUCCCAGCGUCACGAGCAGCCAA   563 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108475265 (LOC108475265), mRNA	uncharacterized LOC108475265(LOC108475265)	coding protein	psRNATarget
XM_017762049.1	ncRNA:24   GAAGGGUCGCAGUGCUCGUCGGCU   1   ||||||||||||||||*||||||| targets:606   CUUCCCAGCGUCACGAACAGCCGA   629 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108462047 (LOC108462047), mRNA	uncharacterized LOC108462047(LOC108462047)	coding protein	psRNATarget
XM_017766572.1	ncRNA:24   GAAGGGUCGCAGUGCUCGUCGGCU   1   ||||||||=||=|||||||||||| targets:606   CUUCCCAGUGUUACGAGCAGCCGA   629 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108466226 (LOC108466226), mRNA	uncharacterized LOC108466226(LOC108466226)	coding protein	psRNATarget