Search result

BaseInfo

ncRNA ID	ath_circ_028435
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:20203458-20207482[-/-]
Reference genome	TAIR10
Source	PlantcircBase
Method	find_circ
Type	exonic
Splice junction sequence	AAGCTCTAAAAGTTGACCTTGAATGATCCATCCAACAACATAACAGAGGCCATGTAAGGAGAAGAAAGCCATGGTGATATGACCAAGCCAAACATGATATTTCTCACGGTGTGAAGCGATGTGACCCACATGAGTAAACCAGCCACTAGACTGATAACTCCGGGTAAAACAGCGATTCCAGTAGCTTTCCATTCAAATAA
Tissues	leaf
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	AAGCTCTAAAAGTTGACCTTGAATGATCCATCCAACAACATAACAGAGGCCATGTAAGGAGAAGAAAGCCATGGTGATATGACCAAGCCAAACATGATATCTTGTAGCATGTTCAAAAGGGATATCGATAAGACGGAGAAGAATGGAACCTCTCGAGATTGGAAGAAACAAAAAAACCATACACAACAATCCAATCATTCCTAAACGCAGACCCGTTACCTCCAACAGAAGAATACTGAAAATACACACACACAAAACTAATGATTGGAATGAGAAGGAAAAAGACAAAGATGGGAAAAAAAAAGGAAGAGTTTTAAGAACCTTCGATTCTTGGGAAGGACGTGGAAGCGTTCAAGAAGGTCAAGATTCCTCAAGGTATAAGCATAGATAGACCAAAGGAAAAAAACAGAGAAGACCATAATTCCAAGAAACTCAGCTGCAGAAACAACTCCAAATGGTCCATCCACAAGAACAGGGAATGTCCATAGCCTAAACCTCGGGAATTTCGATATCTTCTTCCTTCACAATCATCATGACACACACATTTATGCAAGAACAAAAATTGATACAACCAAAAGAATGCAATTGGGGATATTATTACACGTACTTAGTGAAGACCTTGTCTTCCCCGGAGATAATGAGATAGAGAGAAGCTAAGACAGAGATGACAAGAATCGGACAACTGAAAATCAAGAACATGGTTCCTGCAAATTTAGACAATTAAAGGATGAAATTAGTTACACTTTTTGGACATGTTTCCGTAGAAAGCAAAGCATCTGCTCGTTAATGTAACCTGTGGTGCCTAGGAAAGTCTTGGAGGAGACAAATGTGAGGAAATCATCACCGAGTTGTTCAGGGTACATCATCATAAGAAAAACAACCCAAGTCACAAAAATCATAGACATTACAACTTTCAATATCCATTTCAAAGATGAAGTAATCACAGATGATGATGATGATGAGTCCTTGGACAAAAGAGGGGTTTCATAATCATCCATCTTTATTTGAATTTCCACTTCTCAGTGTTGTGATGAGAAGTTGGCTCAGAAGCAGCATCGGCTTTTAAGGTGGCGTTACTAGAGATAAACTAATAAGATATTCTTAGAAGAGTCAAGTAAAATTTTCTGGACCATTGAGGTTTCTATCATTCTCATTTATGAAAGATTCCTTCGGACAACAATCCTAGTACACAATAAAAAAAACTATAAAAAAAAATGAGAGTGTCATTAACACGTGAGAGTAACGTACTTGGGAGAGAGTGTCACGTTAGGTTGATTTCAACCACAATTAAGGGTAAGGTGAGAGACTGAGAGTACTTACTACTTTAGTATAGATAAGATGGTTATTATGACGACTATGATGGTTATTGGATAAGCTTACATTACCTGAATCTGAACATATAGAATTTCAACATCATTCGGATTAGCTCGAAAGAAACATTATTCGGTTTCCGCGTTCAAGATCCAGCAGAGAGATAAATTTGCAAAGTTTCACTGTTAGATTGTTTCTGGTAAATGACACTATCTAACAATGTGTTACGTTAAACAAGAATAATCGACTATCATGAAGTTGTATCAATCTCGAACACACAAGTTATAATCAGTCCAAGGAAAAACTTAGATGTATATAGTCAAAAAAATTCTTCATTACACTTTTAAGTAACCGAAACAAAATCCAATAACAAATAAAAGTACCACTTAGACTTAGCTACGATTTACATGTCAACAAAAGAACACTAAGAAATTATAATTAAGTCTCATGAAGTTGTATGTGTAGACAAAAAAGAATTATAATCAGGCCTAGAGAGAGTAAAGTTTGATTTCAACCACACTTTAGGGAAGGTGAGAGTATTGACTATTGAGTATGGATAAGATGATTATAATGACGATTGTAATGGTTGTTGTACCATTATATTTATATATTAAGTTATTAACTCAAAAGAACTAAGAAATTGCTATCATGAAGTAGCATCAATCTCAAAAATTAGTTAAAGTTGTTTCCATAATACATACAGACTGTGATTATATAAATTATATGCATCGATAATATATCTTCGAATTTCCATAATGTTCTTTGGCCTTGAGAGCATCGTTAGAGATCGAAACTGTGGCTGTTGAAGTGGAAAAGAGGATGATTCGCCGATCGCCAGATGCTATGTGACCGTATTTCTTTGGCTACGGTCGTCTGAAGAGTCGCTGGACCGCATACTATCACTCCAACATCCACACTCCCCCATTTCCCATTCAATGACTCAAATATCTCTGCAATTACAAAATAAAAATATTACATGAACCAATCAAAGATTTAACTTAACCGAATCGAGCCAAATATCTACACCAAAAGTCGGATTCAAGAACCGAACGAAACCGTGTCAAACCGTTCCGAATGATTTCAGTTTCTATAATTTTATAAATAAAAAAACGAGATAACTGGACTTGACACCGCTAATTTTGTAGTGTATACCTCTAAAGGCCGGTCTGGTGCCATAACGAATAGTGGTGTAATTCTGGACATCTTCTTCTATTGCCAAGCCCTTAAGCTCTGCTGCAGATGGATTATGGGTTTCTTCTCCATTCAAATCTACCTTGTCGTTGCCATTTGCTTCCACTTCACCGGTTTTGTGTTCCCAGCGATGCCAGAAAACAACCACAAGACCTCCAAAAATCAACACACTTGCAACCATACAAACAACAAACAGAAGTCCCTTGTACCACCATGTTGTTATGTTGTACTTGTTTATGTAAAAGATGTCCACCAATGTGATCATTGCAATAAACCCAATGGTGGAGATAATTAGATAGAGTCCAGACCATATGTTATCCCCTGTACCAACTAAAACCGACATGGAACATCCGTTGGTCCATGGTGTTTTGACAGAAGGATGCACCACCTTGTGAACCATCCCATCTTCCTGTATAACCATGGAACATTGAAGAGTTCAAAAACTAAGTAAGGCCTATTGCAGCTCCCAAAAGAGTTATGTAAGACTTACCAAGCAAGGCTCGGATTGTCGAGTGACATATATGTGAATCTCAAGGTTTAGTTTCTTAGAGAAGAAATGGCAAATGGAAGGTATGTCAATTGCTGAGAGCAGAGAGAGCTCGTCTGAGTTTTTAATGGCCCATACAACTAAAACCTTACCAGGTAAACAATCTTTCCCATCTCTTTTACGGTGTAGGATATCGCTTAAGATGGCAAAAAAAGGCGTAATCCCGATTCCTCCTGCTACTAATACCAGGTTCTCATACCTGCACTCGCAAATAAAGCTTTCTTGAGTAAAGCTAAAGCTTACTGTATTGAAACAATTCATGTAGACGAAATGCATTACGCTAAGTGGTATGGAGATTCATGGCCATAAGGTCCCTCCACACAAGTTGTGATTTTGGGATATGACTCAGGAGAAATAAGCTGGTCTTGATTTTCTGCCTCATATAGAGTTGACAATTGATCCCTAAGCTTTGCAGTCCATCCACCAAGAACTTTTATAAGAACCGCAACATGATGGTTCCCATCTAGAGGACTTGATGAAACACTGAAAGGATGCCACTGTAACCAAGACAGTTCCTTCACTTGAAGAAAGATAAAGCTAAGCGCGTTGTATCGCATATCTGGTAGAATAAGAGAGGAAAATGGTCAGTAAATGCTCTAGATTGGAGGTAGAGGACTCTCATCTACAGAGAAAAAACAGAGCTGTTACTTGGTGGTTTTGAAAGGACAAGTTCAAGAGTTCCACAAGGTAAACTCTTTGCAGAGATAACATCAACAGTCCTTCTTGATTGGTAGAACCTCAAGAAGCGGTCTAGAATGAAGAGAAAGATTCCTCCAGCAACTATACTGAATAAGTAGTCACCAACATGAAGTGCCAAGAAGACGACAAAGACAATGTATAGTTGATGTGTGTAGAAGAAGAGCTCAAAGTAATTCTTTCTCACGGTGTGAAGCGATGTGACCCACATGAGTAAACCAGCCACTAGACTGATAACTCCGGGTAAAACAGCGATTCCAGTAGCTTTCCATTCAAATAA