Search result

BaseInfo

ncRNA ID ath_circ_028433
Species Arabidopsis thaliana
Class circRNA
Genome position 5:20202593-20206705[-/-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence GCTAAATGGTATGGAGATTCATGGCCATAAGGTCCCTCCACACAAGTTGTGATTTTAGGATATGACTGAGGAGAAATGAGCTGATCTTGGTTCTCTGCCTACAATCTTTCCCATCTCTTTTACGGTGTAGGATATCGCTTAAGATGGCAAAAAAAGGCGTAATCCCGATTCCTCCTGCTACTAATACCAGGTTCTCATAC
Tissues aerial, inflorescences, seed, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence GCTAAATGGTATGGAGATTCATGGCCATAAGGTCCCTCCACACAAGTTGTGATTTTAGGATATGACTGAGGAGAAATGAGCTGATCTTGGTTCTCTGCCTCGTATAGATTTGACAACTGGTCTCTAAGCTTTGCAGTCCATCCACCAAGAACCTTTATGAGAACCGCAACATGATGGTTCCCATCTAGAGGGCTTGAAGAAACACTAAATGGATGCCATTGTAGCCAAGATAGTTCCCTCACTTGAAGAAAGATAAAGCTAAGCGCATTGTATCGCATATCTGATTTTTGCGGTATTGAAGAAGAAAAAAGTCAGTAAATGTTTTAGATTAGAGGTAGAAAACAGAGAATAAACAGAGTTGTTACTTGGTGGTTTTGAAAGGACTAGTTCAAGAGTTCCACAAGGTAAACTCTTTGCAGAGATTACATCAACAGTCCTTCTTGATTGGCAGAACCTCAAGAAGCGGTCTAGAATGAAAAGAAATATTCCTCCAGCAACTATACTAAACATGTAATCACCAACATGAAGTGCCAAGAACACAATAAAGACGATGTATAGTTGATGTGTGTAGAAGAAGAGCTCAAAGTAATTCTTTCTCACGGTGTGAAGCGATGTGACCCACATCAGTAAACCCGCCACTAGACTGATAACTCCGGGTAAGATAGCAATTCCGATAGCATTCCATGAAAATATCTGAGAGGAGTAAGTAGTTGATGATGATGAAACTTTACAATAGAAAATAAGAAGATAAAATTGTGACTTATAGAGTATAGACCTATCTTGAACCGATGATCGACACTATACTATAGTAGATAAACTAGGCTATACTATTATGTCAAGATTCAATGATGTTGTAGGATCTTACAAGCTCTAAAAGTTGACCTTGAATGATCCATCCAACAACATAACAGAGGCCATGTAAGGAGAAGAAAGCCATGGTGATATGACCAAGCCAAACATGATATCTTGTAGCATGTTCAAAAGGGATATCGATAAGACGGAGAAGAATGGAACCTCTCGAGATTGGAAGAAACAAAAAAACCATACACAACAATCCAATCATTCCTAAACGCAGACCCGTTACCTCCAACAGAAGAATACTGAAAATACACACACACAAAACTAATGATTGGAATGAGAAGGAAAAAGACAAAGATGGGAAAAAAAAAGGAAGAGTTTTAAGAACCTTCGATTCTTGGGAAGGACGTGGAAGCGTTCAAGAAGGTCAAGATTCCTCAAGGTATAAGCATAGATAGACCAAAGGAAAAAAACAGAGAAGACCATAATTCCAAGAAACTCAGCTGCAGAAACAACTCCAAATGGTCCATCCACAAGAACAGGGAATGTCCATAGCCTAAACCTCGGGAATTTCGATATCTTCTTCCTTCACAATCATCATGACACACACATTTATGCAAGAACAAAAATTGATACAACCAAAAGAATGCAATTGGGGATATTATTACACGTACTTAGTGAAGACCTTGTCTTCCCCGGAGATAATGAGATAGAGAGAAGCTAAGACAGAGATGACAAGAATCGGACAACTGAAAATCAAGAACATGGTTCCTGCAAATTTAGACAATTAAAGGATGAAATTAGTTACACTTTTTGGACATGTTTCCGTAGAAAGCAAAGCATCTGCTCGTTAATGTAACCTGTGGTGCCTAGGAAAGTCTTGGAGGAGACAAATGTGAGGAAATCATCACCGAGTTGTTCAGGGTACATCATCATAAGAAAAACAACCCAAGTCACAAAAATCATAGACATTACAACTTTCAATATCCATTTCAAAGATGAAGTAATCACAGATGATGATGATGATGAGTCCTTGGACAAAAGAGGGGTTTCATAATCATCCATCTTTATTTGAATTTCCACTTCTCAGTGTTGTGATGAGAAGTTGGCTCAGAAGCAGCATCGGCTTTTAAGGTGGCGTTACTAGAGATAAACTAATAAGATATTCTTAGAAGAGTCAAGTAAAATTTTCTGGACCATTGAGGTTTCTATCATTCTCATTTATGAAAGATTCCTTCGGACAACAATCCTAGTACACAATAAAAAAAACTATAAAAAAAAATGAGAGTGTCATTAACACGTGAGAGTAACGTACTTGGGAGAGAGTGTCACGTTAGGTTGATTTCAACCACAATTAAGGGTAAGGTGAGAGACTGAGAGTACTTACTACTTTAGTATAGATAAGATGGTTATTATGACGACTATGATGGTTATTGGATAAGCTTACATTACCTGAATCTGAACATATAGAATTTCAACATCATTCGGATTAGCTCGAAAGAAACATTATTCGGTTTCCGCGTTCAAGATCCAGCAGAGAGATAAATTTGCAAAGTTTCACTGTTAGATTGTTTCTGGTAAATGACACTATCTAACAATGTGTTACGTTAAACAAGAATAATCGACTATCATGAAGTTGTATCAATCTCGAACACACAAGTTATAATCAGTCCAAGGAAAAACTTAGATGTATATAGTCAAAAAAATTCTTCATTACACTTTTAAGTAACCGAAACAAAATCCAATAACAAATAAAAGTACCACTTAGACTTAGCTACGATTTACATGTCAACAAAAGAACACTAAGAAATTATAATTAAGTCTCATGAAGTTGTATGTGTAGACAAAAAAGAATTATAATCAGGCCTAGAGAGAGTAAAGTTTGATTTCAACCACACTTTAGGGAAGGTGAGAGTATTGACTATTGAGTATGGATAAGATGATTATAATGACGATTGTAATGGTTGTTGTACCATTATATTTATATATTAAGTTATTAACTCAAAAGAACTAAGAAATTGCTATCATGAAGTAGCATCAATCTCAAAAATTAGTTAAAGTTGTTTCCATAATACATACAGACTGTGATTATATAAATTATATGCATCGATAATATATCTTCGAATTTCCATAATGTTCTTTGGCCTTGAGAGCATCGTTAGAGATCGAAACTGTGGCTGTTGAAGTGGAAAAGAGGATGATTCGCCGATCGCCAGATGCTATGTGACCGTATTTCTTTGGCTACGGTCGTCTGAAGAGTCGCTGGACCGCATACTATCACTCCAACATCCACACTCCCCCATTTCCCATTCAATGACTCAAATATCTCTGCAATTACAAAATAAAAATATTACATGAACCAATCAAAGATTTAACTTAACCGAATCGAGCCAAATATCTACACCAAAAGTCGGATTCAAGAACCGAACGAAACCGTGTCAAACCGTTCCGAATGATTTCAGTTTCTATAATTTTATAAATAAAAAAACGAGATAACTGGACTTGACACCGCTAATTTTGTAGTGTATACCTCTAAAGGCCGGTCTGGTGCCATAACGAATAGTGGTGTAATTCTGGACATCTTCTTCTATTGCCAAGCCCTTAAGCTCTGCTGCAGATGGATTATGGGTTTCTTCTCCATTCAAATCTACCTTGTCGTTGCCATTTGCTTCCACTTCACCGGTTTTGTGTTCCCAGCGATGCCAGAAAACAACCACAAGACCTCCAAAAATCAACACACTTGCAACCATACAAACAACAAACAGAAGTCCCTTGTACCACCATGTTGTTATGTTGTACTTGTTTATGTAAAAGATGTCCACCAATGTGATCATTGCAATAAACCCAATGGTGGAGATAATTAGATAGAGTCCAGACCATATGTTATCCCCTGTACCAACTAAAACCGACATGGAACATCCGTTGGTCCATGGTGTTTTGACAGAAGGATGCACCACCTTGTGAACCATCCCATCTTCCTGTATAACCATGGAACATTGAAGAGTTCAAAAACTAAGTAAGGCCTATTGCAGCTCCCAAAAGAGTTATGTAAGACTTACCAAGCAAGGCTCGGATTGTCGAGTGACATATATGTGAATCTCAAGGTTTAGTTTCTTAGAGAAGAAATGGCAAATGGAAGGTATGTCAATTGCTGAGAGCAGAGAGAGCTCGTCTGAGTTTTTAATGGCCCATACAACTAAAACCTTACCAGGTAAACAATCTTTCCCATCTCTTTTACGGTGTAGGATATCGCTTAAGATGGCAAAAAAAGGCGTAATCCCGATTCCTCCTGCTACTAATACCAGGTTCTCATAC