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BaseInfo

ncRNA ID ath_circ_028408
Species Arabidopsis thaliana
Class circRNA
Genome position 5:20101749-20102189[+]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence ACCTTGAAAACAACATGGAAGCAGCCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGGTATTTTTTTTCCTCGTTTTCGAAAGCTTGATGGCTATTTACATGATTCTAGTTTTGAGTCTATATTTCCTTTGTGGCAGAACAAGGGAGTGCAGCAGGCTTCGACGGATCAGAAACCAATTAATGAAGAA
Tissues root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence ACCTTGAAAACAACATGGAAGCAGCCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGGTATTTTTTTTCCTCGTTTTCGAAAGCTTGATAACATTGTTGTGTAGTGTGGACTGGATGTCTTATTGAATTGGACTTGTTGACTTGCAGTTACACTTGAATCCTGTTCATGCTGTTGCCCAGCTCCGGCCGTCTATGCAGTCTCTTTCATCCGACAAAAAAAAGAAACAAGAAGAATCCACTGAAGAATCTGTGGGAACATCCAAAAAGCAGGTATAGATCCAACCTTTGCTAAATAATTGAGGTGTATAGATCGGCCTGAGCAGTTAGTTTGGCTATTTACATGATTCTAGTTTTGAGTCTATATTTCCTTTGTGGCAGAACAAGGGAGTGCAGCAGGCTTCGACGGATCAGAAACCAATTAATGAAGAA