ncRNA ID |
ath_circ_028355 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
5:19759867-19761244[+] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
NA |
Type |
exonic |
Splice junction sequence |
TAGCTCCTCATGGAATTGGCAAGTGGATAACTATAATCACCAACCTCAGTCTCATTTCTGTAAGTCTTACATCTCTGTGACGAGCATGATTGAATCAGTTCTTGTGTTTGATGCAGAGTATTTGAATGTGCCACCAGAAACAGAGACTAGGGAAGTTCAGCGGCCTGTGACTCGATCTTCTCCAAATGTTATCTTTAAAG |
Tissues |
leaf, aerial, whole_plant |
Exon boundary |
Yes-Yes |
Splicing signals |
AG-GT |
circRNA sequence |
NA |
Genomic sequence |
TAGCTCCTCATGGAATTGGCAAGTGGATAACTATAATCACCAACCTCAGTCTCATTTCTGTAAGTCTTACATCTCTGTGACGAGCATGATTGAATCAGTTAACTCTTACAACACTGTAATAACCATGATTGAATTGGTATCTTAACTCCAGCGGATGTGCCTGACTGCACGATGACTGAAGTCACATTGAACCAAGAAGATCACTCGTACATGTTTGATGATGAAAATACTCCTGTGAAGGCATGTAGCGAGTTGGGTTACCATGTCACAACAGGTGGGTTTTTTTTTTCAAGTGATCGATCATTTCCATTCCTGATGTATGGTTGACGATGGTTTCTAATCTAAAGAATCTTTGGCTTTAGAGGACACGAACAGGAAAATGGAAGTGCACAGTGAGACACGCTCTGCTTTAAAAAGGCGTCGGATGTTGCAGTTTGAAGACCAACCTGAAACATCCCTTTTCAGCAGTGAGAGTTTCTCTGCAATCTTAAAATCAAGTGTGAGTATACAATACCCATATCTTGTCTCTAGCTAGGCACCAAATGACCACATATGCATTGCAGATAACCAAACTGATTGCTCACTTATTGATTATCACACTGCATATGGACTGCAATGTGAATGCATGTTCCTTTCAAACGTTTGCAAATGGGATTCTGTTTTGTTTCATAGACTTTTTACTTCTACTCCTAGAACAAATTCAAGCCTCTTACTTTCTTAGTATCTGGCTACCTAATTCAGTTGTGATCTTATTATCGAAGTAACATTGGATAGCTTAGGAGGTTGTATGAGGTTCTGATGCTATCTTTAATGCTTTGATTGATGATTCTTTATGCATGTTCAGGCTAGAGATGACACATTTGATGAGCTTTTACCCGAAGGGTCTCAGCTTATAGAAGGGTTTTCAGGTTGGGCTCTTATAATTCTTCCGAGTCAGTCGTGCCAATGTGTTTTCCATTTAAACAAAACACTGTCTCTTTTTCAGAAGACGCTTCTGCCTCTAGCTTCGAGGGCCTTGATCTGTACGCTGAAGAGTGGTATGCTGATTGCTTAAATGATGCTGAGACTCCAATGCTACCTGATGACTTGTATGTTTCAACCTTTCTTTTTGCTTATGTTATGTTTAGTAGCATCATTTTGCTTCATTAACTGGTTACTATTGTTGTTTTTCTCAGAAACTTTGGTTCACCTGATGTTCAAGTAGATATTTCAGGTTAGATATCTTTGTTTTCATCTCTTCCTTAGCCTGTCCTAGCTCTGGCTTCTCTTGCTAACATCCTTGTGTTTGATGCAGAGTATTTGAATGTGCCACCAGAAACAGAGACTAGGGAAGTTCAGCGGCCTGTGACTCGATCTTCTCCAAATGTTATCTTTAAAG |