ncRNA ID | novel_gar_miR621 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:21696867-21696949 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 63 - GCAAGCCAAUCUUGGCUAACU - 83 |
Stem-loop(if miRNA) |
--A         A  A       A  CAUCUCU  UCAUUGGCU    UAGCCAAGA UG CUUGCCU CU       CA         G    ||||||||| || ||||||| ||       ||         G    AUCGGUUCU AC GAACGGA GA       CG         G UCA         A  C       C  ------A  AACACUCAA |
Stem-loop sequence | AUAGCCAAGAAUGACUUGCCUACUCAUCUCUCAUCAUUGGCUGGGAACUCACAAGCAAGCAGGCAAGCCAAUCUUGGCUAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017792124.1 |
|
2.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108487760 (LOC108487760), mRNA | uncharacterized LOC108487760(LOC108487760) | coding protein | psRNATarget |