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BaseInfo

ncRNA ID novel_gar_miR621
Species Gossypium arboreum
Class miRNA
Genome position Chr10:21696867-21696949 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 21
Mature sequence(if miRNA) 63 - GCAAGCCAAUCUUGGCUAACU - 83
Stem-loop(if miRNA) --A         A  A       A  CAUCUCU  UCAUUGGCU
   UAGCCAAGA UG CUUGCCU CU       CA         G
   ||||||||| || ||||||| ||       ||         G
   AUCGGUUCU AC GAACGGA GA       CG         G
UCA         A  C       C  ------A  AACACUCAA
Stem-loop sequence AUAGCCAAGAAUGACUUGCCUACUCAUCUCUCAUCAUUGGCUGGGAACUCACAAGCAAGCAGGCAAGCCAAUCUUGGCUAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017792124.1
ncRNA:21   UCAAUCGGUUCUAACCGAACG   1
  **|||*||||||||||||||=
targets:545   CCUUACCCAAGAUUGGCUUGU   565

2.0 PREDICTED: Gossypium arboreum uncharacterized LOC108487760 (LOC108487760), mRNA uncharacterized LOC108487760(LOC108487760) coding protein psRNATarget