| ncRNA ID | novel_gar_miR612 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr13:23965575-23965734 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 137 - UUGGGACACAGGCCAUGGCAGGCU - 160 |
| Stem-loop(if miRNA) |
-- A C C U A U C A -AGGG G CCU CCAUGGCCUGUGUCCUAAGGCCUGAUGC GGC AUC GAGUUG ACG G ACGGCCAUU GAAGU GUGA U ||| |||||||||||||||||||||||||||| ||| ||| |||||| ||| | ||||||||| ||||| |||| GGA GGUACCGGACACAGGGUUCCGGACUACG CCG UAG CUCAAC UGC C UGUUGGUAG CUUUA CAUU A UC C U A U C C U - AAAAA U |
| Stem-loop sequence | CCUACCAUGGCCUGUGUCCUAAGGCCUGAUGCCGGCCAUCUGAGUUGAACGUGCACGGCCAUUAGAAGUAGGGGUGAGUAUUUACAAAAAAUUUCGAUGGUUGUUCCCGUCCAACUCUGAUAGCCUGCAUCAGGCCUUGGGACACAGGCCAUGGCAGGCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017783094.1 |
|
3.0 | PREDICTED: Gossypium arboreum phospholipase D zeta 1-like (LOC108480190), transcript variant X2, mRNA | phospholipase D zeta 1-like(LOC108480190) | coding protein | psRNATarget | |||||||||
| XM_017783093.1 |
|
3.0 | PREDICTED: Gossypium arboreum phospholipase D zeta 1-like (LOC108480190), transcript variant X1, mRNA | phospholipase D zeta 1-like(LOC108480190) | coding protein | psRNATarget |