Search result

BaseInfo

ncRNA ID ath_circ_028179
Species Arabidopsis thaliana
Class circRNA
Genome position 5:19207502-19209688[+/+]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence AGAAATTGGAAATGGAGTTGCCGATTCATGGTTAATGCCGCTTACACGACAAGCGGAAATAGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAATCATAATGCTTCACGGAATCGCATCTCAATGTTCTGATGATACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTT
Tissues leaf/aerial, inflorescences, seed, whole_plant
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence AGAAATTGGAAATGGAGTTGCCGATTCATGGTTAATGCCGCTTACACGACAAGCGGAAATAGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAGATCTCAGGTTCTTGATACACTTTCTTGAAAATCCTAAAATAGGTTCTTGATCATTATTTACATAGTGTTTAAGTTTCATGGATGTTGATTAATAATGGAACAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGTGACGGTGGCCCTCCGGTTTACAACTATATATCCTTGGCCGGTCCTCATGCTGGCATCTCCTCTGTTCCTATGTGTGGTGTAAGTTTTTTTTATAAATCTTTTTTCTCTAAATATTTTTTCTATGATTTTAATTTAATCAATCAATCACAGTAACAACATTGTCTTTTTCTTGTTAAAGTCTGGTTTATTCTGTAAGTTAGCAGATGAGCTAATCAAGGGAGATATCTATAGCGACTTCATTCAAGTATAAATCTCTTTCTGTCTTTTTTAGGATTAAATCCTCAGTAGTTACAAATTAATTAACATATATCTTTAATAACCCTGCAGGATCATCTTGCTCCTAGTGGTTATCTCAAAATTCCTACTGTATGTCTACTCACCAAATATATTTTGATGATAAAAAAACTACTTCAAAATTTGAGATATCACAAAATCTTTGTTTTTGATTTATCAGGATATGACAAAGTACTTGGGAAGCTCTAAGTATTTACCTAAGCTTAACAATGAGATACCAGACCAAAGAAACCAAACTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAAGGTTTGGTCTCCTAAAAACCATCTAGACTTTTCAATTATCTTTTGATTCCTCTCTTGATGATTCGGTTTTTGTTTGTTTTACAGTTTCAGGGCGACAAGGTTATAGTTCCAAAAGATTCATCTTGGTTCGGGTTTTATCCGGATGGTGAATTCGAACCTCTTCTCTCTGCTCAACAGACAAAGCTCTATACAGAGGATTGGATCGGTCTGAAAACATTGGATGATGCGGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAACATATCAGAATGGTAGATGAAGATGTCGTCAAACACGTTGTACCTTATCTCCAGGACCAACCGTCTTCGGTGCAAAGCTTCAACCGCAAGACGAAGCAGCCCTTGCATGCTTAAAAATAGCAAATACCACAATAGTTATACTTATTCATGCAATATATGTCGAAAAAGCTTAGTGATGATTTTGTAGAATCCTTATTCTTATAGAAATATATACATACTTATCTGAAAAATCGAATTAATCAGTAGAGAAACGACTCATGAGATCTTCATCACCACATTTGTATCAAGGCTTCAATGGTTTTCTCAACATGAGAAACTTCCAATCTCATTTTTTTTTGTTTTTGTTGTTGTAGAAGTCTCCCAAAATGACTCGAAGTTTTTTCCTTTTTGGTTCTTTAGTCTCACCAAATTACATATTATTTTTAAATAATCTAACAATTCTCCAAATATCCTAAAAACTAATTCATATCTCTCCAAATCTAAAATTTCCTAAATTCCACCAAATTTTCTAAAATCATGAATCCAATACACTCCCTGATTCAAATCTCTCCAAATCTAAAATTTCCTAAGTTCCACCAGATAATGAATCCAATACACACCCCTAAGAGAGGCAACGCGGAGATGTCATTAGAGGAGGAACTAGGAAGCAGAGCGTTAATGCAAAATGTTACCAAAAACGTTAATGCAAGATATCAACTGATCAGCACCGTCCATTTCAAACTGAGAATGTAAAAACCAATCACAATCGTACATTTTTTCATCTAGTTCTTCGTTCTTGGCCACAACGTCCAACCACATGACGCTCTTTCTACTCACTTTATATATTCCCATCTCAAAAGTTCTTGGAGACACAAAATATCATAAACATATAAACGCCAATTAGAACTTTTTTACTTGTGGCGGTTTACAATGGAGAAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTTGATATCTCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCTCAATGTTCTGATGATACAAATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTT