ncRNA ID | novel_gar_miR591 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:11908014-11908092 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 56 - GUAGGACCCAAGGAGGAUGCUGCU - 79 |
Stem-loop(if miRNA) |
--    -       G        G   AAAUUA    A       UAGU UCCUUUU GGGUCCUA UGG      GAGG AUAGG   |||| ||||||| |||||||| |||      |||| ||||U   GUCG AGGAGGA CCCAGGAU AUU      CUCU UGUUG UC    U       A        G   -----G    A     |
Stem-loop sequence | UAGUUCCUUUUGGGGUCCUAGUGGAAAUUAGAGGAAUAGGUGUUGUAUCUCGUUAGUAGGACCCAAGGAGGAUGCUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017765933.1 |
|
1.5 | PREDICTED: Gossypium arboreum protein EXORDIUM-like 4 (LOC108465577), mRNA | protein EXORDIUM-like 4(LOC108465577) | coding protein | psRNATarget |