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BaseInfo

ncRNA ID novel_gar_miR591
Species Gossypium arboreum
Class miRNA
Genome position Chr13:11908014-11908092 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587;SRR1029586
Length 24
Mature sequence(if miRNA) 56 - GUAGGACCCAAGGAGGAUGCUGCU - 79
Stem-loop(if miRNA) --    -       G        G   AAAUUA    A    
  UAGU UCCUUUU GGGUCCUA UGG      GAGG AUAGG
  |||| ||||||| |||||||| |||      |||| ||||U
  GUCG AGGAGGA CCCAGGAU AUU      CUCU UGUUG
UC    U       A        G   -----G    A    
Stem-loop sequence UAGUUCCUUUUGGGGUCCUAGUGGAAAUUAGAGGAAUAGGUGUUGUAUCUCGUUAGUAGGACCCAAGGAGGAUGCUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017765933.1
ncRNA:24   UCGUCGUAGGAGGAACCCAGGAUG   1
  *|||||||||||||*|||||||||
targets:795   CGCAGCAUCCUCCUCGGGUCCUAC   818

1.5 PREDICTED: Gossypium arboreum protein EXORDIUM-like 4 (LOC108465577), mRNA protein EXORDIUM-like 4(LOC108465577) coding protein psRNATarget