ncRNA ID | ath_circ_027995 |
Species | Arabidopsis thaliana |
Class | circRNA |
Genome position | 5:18535760-18536189[-] |
Reference genome | TAIR10 |
Source | PlantcircBase |
Method | SMALT and Segemehl |
Type | exonic |
Splice junction sequence | CTCATAGTCATGAGAGTGCCAAAGCTTTTGCTCCTCCGGATCAAGACTCTCAAATAACCTCTCCGACACAATATACTCGATCCCTGGCAGGTTTAAACACGCGAAAGAACACAAATGGAGACTCATCTGTTTGATCGGTTTCAACGATTGCATCATCGCCGCTCCTTTATCCATCACCACCGTCTTCATCGTCTTTGGAT |
Tissues | siliques and seeds |
Exon boundary | Yes-No |
Splicing signals | AC-CT |
circRNA sequence | NA |
Genomic sequence | CTCATAGTCATGAGAGTGCCAAAGCTTTTGCTCCTCCGGATCAAGACTCTCAAATAACCTCTCCGACACAATATACTCGATCCCTGGCAGGTTTAAACACGAAACATGATAAAAATACATCTCTTCAAAAATTATACGCATGCATACTTCGAGTTCAAAATTACTTTGTTTGTCAAAAAATGTTTGAGAAAATACACATATAGATACAGACCGATGAGATGGGGTTTAGAGGAGTCGCAATCGTAAACAGCACATTGAAGAAAGTCTTGGTTGAGTCGATGAACATAGAAGTTGACTTCAATCTGACGGCTAGGATCGTGACCATAACAAGCGAAAGAACACAAATGGAGACTCATCTGTTTGATCGGTTTCAACGATTGCATCATCGCCGCTCCTTTATCCATCACCACCGTCTTCATCGTCTTTGGAT |