Search result

BaseInfo

ncRNA ID novel_gar_miR588
Species Gossypium arboreum
Class miRNA
Genome position Chr13:106684014-106684170 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 134 - UAAAGGUCUUGACCUCUAGCGGCG - 157
Stem-loop(if miRNA) --      A            C   C       GUGGGAA      C    A            C     --  G   G
  UCGCUA AGGUCAAGACCU UAG GGCGUUU       AAGCGC GCUA AGGUCAAGACCU UAGCG  GC UUU U
  |||||| |||||||||||| ||| |||||||       |||||| |||| |||||||||||| |||||  || ||| G
  GGCGAU UCCAGUUCUGGA AUC CCGCGAA       UUUGCG CGAU UCCAGUUCUGGA AUCGC  UG AAG G
GC      C            A   A       AGGGGUG      A    C            A     GA  A   G
Stem-loop sequence UCGCUAAAGGUCAAGACCUCUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGACCUCUAGCGGCGUUUGUGGGGAAAGUAGCGCUAAAGGUCUUGACCUCUAGCAGCGUUUGUGGGGAAAGCGCCACUAAAGGUCUUGACCUCUAGCGGCG