| ncRNA ID | novel_gar_miR579 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:87029903-87029971 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 46 - CAAGUGAUGAUGUGGCAUAAUCUC - 69 |
| Stem-loop(if miRNA) |
-- A C UAUA GAUUGU CCACGUCAUCAC UGAAAAUU U |||||| |||||||||||| |||||||| U CUAAUA GGUGUAGUAGUG ACUUUUAA U CU C A UUUU |
| Stem-loop sequence | GAUUGUACCACGUCAUCACCUGAAAAUUUAUAUUUUUUUAAUUUUCAAGUGAUGAUGUGGCAUAAUCUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017772326.1 |
|
2.5 | PREDICTED: Gossypium arboreum cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial (LOC108470837), transcript variant X2, mRNA | cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial(LOC108470837) | coding protein | psRNATarget | |||||||||
| XM_017772325.1 |
|
2.5 | PREDICTED: Gossypium arboreum cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial (LOC108470837), transcript variant X1, mRNA | cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial(LOC108470837) | coding protein | psRNATarget |