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BaseInfo

ncRNA ID novel_gar_miR576
Species Gossypium arboreum
Class miRNA
Genome position Chr1:48099589-48099752 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587;SRR1029586
Length 24
Mature sequence(if miRNA) 141 - UUGUGAAUAUUAGAAUAUGGCAUG - 164
Stem-loop(if miRNA) --          UAGA     -  -      AG  UA -------------------  --   UUUGUAUAUGUUUUGUAAUGUAAAUAUCAUGC
  UUGUGAAUAU    AUAUG GC AUGUAU  GC  G                   AA  GUA                                C
  ||||||||||    ||||| || ||||||  ||  |                   ||  |||
  AGCAUUUGUG    UGUAU CG AUUAAA  CA  U                   UA  UUG                                A
UG          -UAG     U  U      --  -- AGUGUAUAGUAUAUGGUUU  GU   GUAUUCAAGUUGGUGUUUGAUCGGUAUAGUGU
Stem-loop sequence UUGUGAAUAUUAGAAUAUGGCAUGUAUAGGCUAGAAGUAUUUGUAUAUGUUUUGUAAUGUAAAUAUCAUGCCAUGUGAUAUGGCUAGUUUGUGGUUGAACUUAUGGUUUGAUUUUGGUAUAUGAUAUGUGAUACAAAUUAUGCUUAUGUGAUGUGUUUACGAGU