ncRNA ID | novel_gar_miR576 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:48099589-48099752 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 141 - UUGUGAAUAUUAGAAUAUGGCAUG - 164 |
Stem-loop(if miRNA) |
--          UAGA     -  -      AG  UA -------------------  --   UUUGUAUAUGUUUUGUAAUGUAAAUAUCAUGC   UUGUGAAUAU    AUAUG GC AUGUAU  GC  G                   AA  GUA                                C   ||||||||||    ||||| || ||||||  ||  |                   ||  |||   AGCAUUUGUG    UGUAU CG AUUAAA  CA  U                   UA  UUG                                A UG          -UAG     U  U      --  -- AGUGUAUAGUAUAUGGUUU  GU   GUAUUCAAGUUGGUGUUUGAUCGGUAUAGUGU |
Stem-loop sequence | UUGUGAAUAUUAGAAUAUGGCAUGUAUAGGCUAGAAGUAUUUGUAUAUGUUUUGUAAUGUAAAUAUCAUGCCAUGUGAUAUGGCUAGUUUGUGGUUGAACUUAUGGUUUGAUUUUGGUAUAUGAUAUGUGAUACAAAUUAUGCUUAUGUGAUGUGUUUACGAGU |