ncRNA ID | ath_circ_027862 |
Species | Arabidopsis thaliana |
Class | circRNA |
Genome position | 5:17757153-17757395[-] |
Reference genome | TAIR10 |
Source | PlantcircBase |
Method | SMALT and Segemehl |
Type | exonic |
Splice junction sequence | CGTGTCGTCCATGTCGTCCTTCTTCTTCTTCCTCCTCCTGAGGTCTCTGGCCCCTCAAAGGCGGCCTAATGACACCGAACGGTCCTTGGACTCGGACAATTGAAGATCGATCTTCAAAGCTTGAGCAATAACCTCGGGTCCAAATCCATTGAAAATGTTCTTCTGTGGCTGTTGCTCTCGTCCTTGTAGCCATACTTGAC |
Tissues | siliques and seeds |
Exon boundary | No-No |
Splicing signals | AC-CT |
circRNA sequence | NA |
Genomic sequence | CGTGTCGTCCATGTCGTCCTTCTTCTTCTTCCTCCTCCTGAGGTCTCTGGCCCCTCAAAGGCGGCCTAATGACACCGAACGGTCCTTGGACTCGGACAATGTTTCCACGGTTGTCATCTTGGTTCTGAAGTTGCTGTGCTGTCTGAAGATCGATCTTCAAAGCTTGAGCAATAACCTCGGGTCCAAATCCATTGAAAATGTTCTTCTGTGGCTGTTGCTCTCGTCCTTGTAGCCATACTTGAC |