ncRNA ID | ath_circ_027859 |
Species | Arabidopsis thaliana |
Class | circRNA |
Genome position | 5:17756348-17756596[-] |
Reference genome | TAIR10 |
Source | PlantcircBase |
Method | SMALT and Segemehl |
Type | exonic |
Splice junction sequence | GTAAACCTCAACAAAACTAGTCACATTTTCGTACATTATTATTATTACTACGTACTGTTTAACTTCCTTTTACAGTACTCGAGGTTCATTGTTAAGCTGCGGGCCACTGCTGTGAGTCAAAGTGGTCTCGAGCGTGTTGAACTTGACCCTCCTTGCTTCTTCGGGTGAGATTTGGAACCCATTGGTTATGACTTCAAGTG |
Tissues | siliques and seeds |
Exon boundary | No-No |
Splicing signals | AG-GT |
circRNA sequence | NA |
Genomic sequence | GTAAACCTCAACAAAACTAGTCACATTTTCGTACATTATTATTATTACTACGTACTGTTTAACTTCCTTTTACAGTACTCGAGGTTCATTGTTAAGCTGCAGTTTTAAGCTCTTAAGCTGCAGCCACCCTTGGCCTTCCGTAGCTAGCTGGGCCACTGCTGTGAGTCAAAGTGGTCTCGAGCGTGTTGAACTTGACCCTCCTTGCTTCTTCGGGTGAGATTTGGAACCCATTGGTTATGACTTCAAGTG |