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BaseInfo

ncRNA ID ath_circ_027859
Species Arabidopsis thaliana
Class circRNA
Genome position 5:17756348-17756596[-]
Reference genome TAIR10
Source PlantcircBase
Method SMALT and Segemehl
Type exonic
Splice junction sequence GTAAACCTCAACAAAACTAGTCACATTTTCGTACATTATTATTATTACTACGTACTGTTTAACTTCCTTTTACAGTACTCGAGGTTCATTGTTAAGCTGCGGGCCACTGCTGTGAGTCAAAGTGGTCTCGAGCGTGTTGAACTTGACCCTCCTTGCTTCTTCGGGTGAGATTTGGAACCCATTGGTTATGACTTCAAGTG
Tissues siliques and seeds
Exon boundary No-No
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence GTAAACCTCAACAAAACTAGTCACATTTTCGTACATTATTATTATTACTACGTACTGTTTAACTTCCTTTTACAGTACTCGAGGTTCATTGTTAAGCTGCAGTTTTAAGCTCTTAAGCTGCAGCCACCCTTGGCCTTCCGTAGCTAGCTGGGCCACTGCTGTGAGTCAAAGTGGTCTCGAGCGTGTTGAACTTGACCCTCCTTGCTTCTTCGGGTGAGATTTGGAACCCATTGGTTATGACTTCAAGTG