ncRNA ID | novel_gar_miR573 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:49866832-49866999 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACACGGGCGUGUAGUUGGCCGUG - 24 |
Stem-loop(if miRNA) |
--U    U   -     GA      G  U    G     -----CCCCUUC    UAAAAU   AAAAUAGAAUGCCUAGGUUUUUUCACA    GGCC GGC ACAUG  CGUGUG UC GGCC UGUGU            ACCU      UUC                           C    |||| ||| |||||  |||||| || |||| |||||            ||||      |||    CCGG UUG UGUGC  GCACAC GG CCGG ACACG            AGUG      UGC                           G GUG    -   A     GG      -  U    G     AUCUAUGUCUCC    ------   CGGUUCAGUGUGUGGGAACACGAUCCG |
Stem-loop sequence | UGGCCUGGCACAUGGACGUGUGGUCUGGCCGUGUGUCCCCUUCACCUUAAAAUUUCAAAAUAGAAUGCCUAGGUUUUUUCACACGGCCUAGCACAAGGGUGUGUGACUUGGCCGUGUGACCUCUGUAUCUAGCACAGGGCCUGGCACACGGGCGUGUAGUUGGCCGUG |