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BaseInfo

ncRNA ID novel_gar_miR573
Species Gossypium arboreum
Class miRNA
Genome position Chr1:49866832-49866999 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - CACACGGGCGUGUAGUUGGCCGUG - 24
Stem-loop(if miRNA) --U    U   -     GA      G  U    G     -----CCCCUUC    UAAAAU   AAAAUAGAAUGCCUAGGUUUUUUCACA
   GGCC GGC ACAUG  CGUGUG UC GGCC UGUGU            ACCU      UUC                           C
   |||| ||| |||||  |||||| || |||| |||||            ||||      |||
   CCGG UUG UGUGC  GCACAC GG CCGG ACACG            AGUG      UGC                           G
GUG    -   A     GG      -  U    G     AUCUAUGUCUCC    ------   CGGUUCAGUGUGUGGGAACACGAUCCG
Stem-loop sequence UGGCCUGGCACAUGGACGUGUGGUCUGGCCGUGUGUCCCCUUCACCUUAAAAUUUCAAAAUAGAAUGCCUAGGUUUUUUCACACGGCCUAGCACAAGGGUGUGUGACUUGGCCGUGUGACCUCUGUAUCUAGCACAGGGCCUGGCACACGGGCGUGUAGUUGGCCGUG