ncRNA ID | novel_gar_miR573 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:49866832-49866999 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACACGGGCGUGUAGUUGGCCGUG - 24 |
Stem-loop(if miRNA) |
--U U - GA G U G -----CCCCUUC UAAAAU AAAAUAGAAUGCCUAGGUUUUUUCACA GGCC GGC ACAUG CGUGUG UC GGCC UGUGU ACCU UUC C |||| ||| ||||| |||||| || |||| ||||| |||| ||| CCGG UUG UGUGC GCACAC GG CCGG ACACG AGUG UGC G GUG - A GG - U G AUCUAUGUCUCC ------ CGGUUCAGUGUGUGGGAACACGAUCCG |
Stem-loop sequence | UGGCCUGGCACAUGGACGUGUGGUCUGGCCGUGUGUCCCCUUCACCUUAAAAUUUCAAAAUAGAAUGCCUAGGUUUUUUCACACGGCCUAGCACAAGGGUGUGUGACUUGGCCGUGUGACCUCUGUAUCUAGCACAGGGCCUGGCACACGGGCGUGUAGUUGGCCGUG |