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BaseInfo

ncRNA ID ath-miRf10998-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACUCGACCCCCUGGUCGAGU - NA
Stem-loop(if miRNA)          -CC           ----------   GCAUCAUCGCUUUAGAUUCUUCUCGAUUCCGCACUCAA
ACUCGACCC   UGGUCGAGUAG          AAA                                      C
|||||||||   |||||||||||          |||                                      C
UGAGCUGGG   ACCAGCUCAUC          CUG                                      A
         UCC           ACCCAGCUCA   UUCAGCCUCAGAAGAAGAGAAAGAGUACGAGCUUACAG
Stem-loop sequence ACUCGACCCCCUGGUCGAGUAGAAAGCAUCAUCGCUUUAGAUUCUUCUCGAUUCCGCACUCAACCAGACAUUCGAGCAUGAGAAAGAGAAGAAGACUCCGACUUGUCACUCGACCCACUACUCGACCACCUGGGUCGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:20   UGAGCUGGUCCCCCAGCUCA   1
  ||||||||||||||||||||
targets:437   ACUCGACCAGGGGGUCGAGU   456

0.0 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:20   UGAGCUGGUCCCCCAGCUCA   1
  |||||||||*||||||||||
targets:1925   ACUCGACCACGGGGUCGAGU   1944

1.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget