| ncRNA ID | novel_gar_miR572 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:49914890-49914976 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029588;SRR1029587;SRR1029586 |
| Length | 21 |
| Mature sequence(if miRNA) | 67 - GCAGCAUCUUCAAGAUUCACA - 87 |
| Stem-loop(if miRNA) |
-- U A AAAGUAUAGUAC CAGGCC GCAGCAUC UCAAGAUUC CAUGC GGC A |||||||| ||||||||| ||||| ||| U CGUCGUAG AGUUCUAAG GUACG UUG A UA U A --------AAGU UUUUCG |
| Stem-loop sequence | GCAGCAUCUUCAAGAUUCACAUGCAAAGUAUAGUACGGCCAGGCCAUAGCUUUUGUUUGAAGCAUGAGAAUCUUGAUGAUGCUGCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017771163.1 |
|
2.5 | PREDICTED: Gossypium arboreum polygalacturonate 4-alpha-galacturonosyltransferase-like (LOC108469995), mRNA | polygalacturonate 4-alpha-galacturonosyltransferase-like(LOC108469995) | coding protein | psRNATarget | |||||||||
| XM_017787719.1 |
|
3.0 | PREDICTED: Gossypium arboreum 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like (LOC108484080), mRNA | 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like(LOC108484080) | coding protein | psRNATarget |