Search result

BaseInfo

ncRNA ID	ath_circ_027819
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:17658086-17661154[-]
Reference genome	TAIR10
Source	PlantcircBase
Method	find_circ
Type	exonic
Splice junction sequence	CAAGAACCCAACGGCTTGTCTAATATGTTTCAGTTCTTCCCAAGACGGCCCAGAATACTGCCAAGTCACAGAAAAGAAAATAAATTTTGATAGAACGACCCTCCACGAGCCACTTTTGATCTCCATGCACATTGGGTCGTGATAGCTGCTTTCTTTAGTTTTCTGTAATGCAGGCGAGCCAGGTATCCACGGCACCAAGT
Tissues	leaf
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CAAGAACCCAACGGCTTGTCTAATATGTTTCAGTTCTTCCCAAGACGGCCCAGAATACTGCCAAGTCACAGAAAAGAAAATAAATTTTGATAGAACGACCTGAAGGAAATTTAAGTATTCTTGTAAGAAAATCATCTCTCAGAAATTTTTACTTCTTTGGCTTGACAACACCATAGCTCTAGCTCCGCAAGCCCGGATTTTACAAATTCACCATTGCTAAATGTACAGCACTCTTTACGCAGAAGGAGACTGTAAGATACCAAAGAAGCCGTGTAAGTGAGAACAGAGTTCATAGTTTTGTAGTAGGCGAATTAGAATTAAACTTACCTGTTGAAAAGTTGTACGTTAATGTATGAGAAAGTTTGAGAGTATATCTTCTGGATGAGTACTAAAGGAACCTGGACATTTCATGTAACATATGAGAATTGGTGTATTGAAGTGAGGACACATTAAGTACAATGCCAATGGAACAATTATCCTTACATGATTTTCTTTCAGTGTGACAAGAAGCGAATTAAGACCGTCGATAATGCTTTGCCAGTGAACTGCAGGAGAATCTTTTCCAAAGGACCTGCCAGATCTTAGCATCCCTCCTTTAGAAGATCTGGGTGCCTGAAGTTTTCATTTTGAAAAACCAAAATCTATCATCAAAGTGCAAAAAGAAACATTCATCACAGCATTAGGATAGAAAGAATCCAGCAAGGAACCTGAATGCATAGAGAAAGTAAAGTTGATAACTCTCTCTTCAAGTTATCCCTAACCATCCCAAACATTTTCTCAACATAGGCTGCAAGCTGTTGCTTGAAAAGCAGAGCCGGGTACTTTGCCTCCACTGGGCGGACCACTGCAAGAGCAGCAGCTTCAGCTGCAGCAGCAAGGTTGCCTGAAGCGGGTGAAGAGCGGAAGCTCTGGTAAACAAGATAGGGAGAGAGGATAGTTAAGATTCTGATATCATAAACAAAAAGTTGAACCAAAAAAGTCATATTAACACAATAAAATTGTGATACAAACCATGGCCATCCTTCCAAATAAAGAAGTTGAAGCAGGTGGCTTCTTGCTTTGTGTTGCTCCGCTGCCATTGGTTTTAAGACTTTTTTGAAGCAAAAATAGTAGTGCCGATGTGCTTGTCAACCAATACGCCAAGTGACTATTGTCATCCTCATTCTGAAAATATCAGCAGAACGGTGAAAATTCTTAGTTTAAGTAATTTTGATCATGCAAAAAATAAATCTTTCATAATCCATATTTCAGATAAGCAGATGGCACAGCCACTACACACAAAATGAGGATAATTCCATCATGCGTGTAAATCCTACATTGAAACAGTGTGAAGATTCCCAATTACCTCAATCGCGGAACCAATCATCTGAATCAGACGATCAAACACATTAGTCTTCTCAGATTCGAAACACTTCCAGTGAAGTAGACACTTGTAAATTGTAAATGCAGCCACAGGTTTTCCATTACTGAAACCGATGTTGTCTTTTACACAGTCAATGAGAGCATCAACATTCATCTGCAGTGACAATACAAATCAAGTTAGCAGAATTATCAACTAACAGCAGTGTGAAGTACTATGACGTAGTTGGACTACATACAATTTGACGTTCTGCAGCAGATTTCCCAGCCTTGCCATCAACTGGTGTTGTAAACTCGGCTTCCTGGAAAAATAGACTTTACAGATTAATAAACTAATGGAAAAATGCAAACAAAAAGAACGTCATGAGAACCAAGTGATCGAGATAGCTGGTTGGAGGATATATACATTGAACTCCTTTTCCAAGTTCGTTTGGTGGCCATTTTCCAAATTCTACAAACAGAATGAGGACGAAGTTAACATCTAATGGCCTGGTTAAAAGGCAGATCAACATATTTCAGAGTTGCAGAGAAACTTTCTACCTTAACAGGTGCAGTTGGAGGATGTCCTAGATTTGTCCTCACAGGAGTGCTTATTGTTTGCTGATGCATAATTTTCTTCTCAGCTTCCATATCTAATATTTTCTCTTCAAGCCTGGAGATGAAACATCAACAAGACAAGTAAGGAATCACCGCAAGGGCTCTCGGCAATGCTTTGGAAGGATAGACTATTGCAAAGGATACCTCTGCATTGCAGTCTTCAACTTCACTAGTTTAGATTCAGCCTCCAATGCTTGATTTAGTCTATCCTGGCTAATCTTGGTGGTCTCTTGAAGTTTTTTCTCTGTCTCACCGATTTTCATTTCCAGTGAACTCACCATACTCTGTAAGAAGAGCAATTTAGACAAAAAAGATCAATCGTTTTTCAGCAGAGTTTGTCATCTGAAGAGATCTGAGTAGTTAATATTCTCAAATCTTAAGTATTTTTGCTCTTCTCCGGTAAGTAAGCTACAAGTTCAGAAATTCTCACAAACCTTCAGCTTTTCATTTTCATTCGTGATCTTATCCATTAATTCCTGATCAACCACAGGAATCTCCTTAATAATCGGGGCAGTCTCAGCAATCTTCTTGGCAGCTTCACGTTCTTTAATAAGCAATGCCTCCGTTTCTTTGCACTTCAGTTGCAATTCCTCCAAAGAAGACTGTGCTTTTGCACTTTCTTGTTTTTTGGCCTCTTCCAGGTCAGTCTGCAATGTTGAAAGAGGATGAAAAACTCTCAATAATATTCATAAAATGCAAGAAGGCCCTGAAAAAATTAGGGTCAAATTTGCGAGAAACAAAATGTGGTCAGCTTTTCAAACAGCAATCACACCCTTATCCGTTTCTCTAACTGCAATCTCCAGGTCAGCTCTTCAACTTGCTTCTCTAGCTTGTTCTTGGCTGCTTGGAGTGCTCCAGTTTCTCTAGCAGCCTAGGTGTAAAATGAATTAAAGAAATTCAGTTAAATTCATGCAAAGCACCATCTTTATAAGTGAGCCTCTGAAACAAGAGACAATGGAACAACACTAGCTAAAGAAAGAAACCACATCTCACCATCTTAAGCTTTCGAAGTTCTCCACGAGCCACTTTTGATCTCCATGCACATTGGGTCGTGATAGCTGCTTTCTTTAGTTTTCTGTAATGCAGGCGAGCCAGGTATCCACGGCACCAAGT