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BaseInfo

ncRNA ID	novel_gar_miR570
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:77206232-77206294 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588;SRR1029586
Length	24
Mature sequence(if miRNA)	40 - AUUGUGUUUGGUUGAAUGGAAUAG - 63
Stem-loop(if miRNA)	-------   UG        G    GA    AACU        GUU  AUUAAAUG AAUG  AUAG    G        |||  |||||||| ||||  ||||        UAA  UGGUUUGU UUAU  UAUC    U GAUAAGG   GU        G    --    AUAA
Stem-loop sequence	GUUUGAUUAAAUGGAAUGGAAUAGAACUGUAAUACUAUUAUUGUGUUUGGUUGAAUGGAAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017755656.1	ncRNA:24   GAUAAGGUAAGUUGGUUUGUGUUA   1   **=|||=|*||||||||||||||| targets:886   GAGUUCUACUCAACCAAACACAAU   909 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108456919 (LOC108456919), transcript variant X2, mRNA	uncharacterized LOC108456919(LOC108456919)	coding protein	psRNATarget
XM_017755655.1	ncRNA:24   GAUAAGGUAAGUUGGUUUGUGUUA   1   **=|||=|*||||||||||||||| targets:1357   GAGUUCUACUCAACCAAACACAAU   1380 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108456919 (LOC108456919), transcript variant X1, mRNA	uncharacterized LOC108456919(LOC108456919)	coding protein	psRNATarget
XM_017779444.1	ncRNA:24   GAUAAGGUAAGUUGGUUUGUGUUA   1   *|=|||||||*=|||||||||||| targets:168   GUGUUCCAUUGGACCAAACACAAU   191 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable S-adenosylmethionine-dependent methyltransferase At5g37990 (LOC108477029), mRNA	probable S-adenosylmethionine-dependent methyltransferase At5g37990(LOC108477029)	coding protein	psRNATarget