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BaseInfo

ncRNA ID novel_gar_miR565
Species Gossypium arboreum
Class miRNA
Genome position Chr1:39250196-39250269 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUUUGACGUCUCUGUAGCGGCGGA - 24
Stem-loop(if miRNA) --     A G       A  G       --G      GA
  AUUUG C UCUCUGU GC GCGGAGA   UAGAUC  A
  ||||| | ||||||| || |||||||   ||||||
  UAAAC G AGAGGCG UG UGUCUCU   AUUUAG  G
GC     - -       G  A       ACG      UA
Stem-loop sequence AUUUGACGUCUCUGUAGCGGCGGAGAGUAGAUCGAAGAUGAUUUAGCAUCUCUGUAGUGGCGGAGAGCAAAUCG