ncRNA ID | novel_gar_miR564 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:6118982-6119034 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 23 |
Mature sequence(if miRNA) | 31 - GUUGGGUUGGAAUCGUUUGGCGU - 53 |
Stem-loop(if miRNA) |
--  UG UU              AAAC   GU  A  CGAUUUCAAUUCAA    C   ||  |  ||||||||||||||   CG  U  GCUAAGGUUGGGUU    G UG  GU -U              GCGU |
Stem-loop sequence | GUUGAUUCGAUUUCAAUUCAAAAACCGUGCGUUGGGUUGGAAUCGUUUGGCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017776017.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108474109 (LOC108474109), mRNA | uncharacterized LOC108474109(LOC108474109) | coding protein | psRNATarget |