| ncRNA ID | novel_gar_miR562 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:67140179-67140333 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029586;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAGGACUAAUUUGCUCUUUGAUC - 24 |
| Stem-loop(if miRNA) |
-- U -CUAA A UUUC UUAUAAUUGUC UU UCA GGAGUAAAUUGGUCCUU UAAA AUUUCAUCUAUUU UGUUAAAAAUUGGU UGGUUA C ||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||| |||||| AGU UCUCGUUUAAUCAGGAA AUUU UAAAGUAGGUAAA ACAAUUUUUAACCG ACCGAU U CU U AAACA C UAUC ----------U UG |
| Stem-loop sequence | UCAUGGAGUAAAUUGGUCCUUCUAAUAAAAAUUUCAUCUAUUUUUUCUGUUAAAAAUUGGUUUAUAAUUGUCUGGUUAUUCUGUUAGCCAUGCCAAUUUUUAACACUAUAAAUGGAUGAAAUCUUUAACAAAAAGGACUAAUUUGCUCUUUGAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752094.1 |
|
1.0 | PREDICTED: Gossypium arboreum universal stress protein PHOS32-like (LOC108453792), transcript variant X3, mRNA | universal stress protein PHOS32-like(LOC108453792) | coding protein | psRNATarget |