ncRNA ID | novel_gar_miR561 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:67143048-67143249 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGGGCAAAAUUCAAUUUGACUCC - 24 |
Stem-loop(if miRNA) |
--          C   C     C     -         U   C      A                     AG    -     U           A  UUUCA   AGUCAAAUUG AUU UGCCC AUUUU CUCAAAAAA GGG AAAUUA UCCUUGUAUGUUAGAUCAAAG  CUAA UUGGU CUUUCUGUUAA AA     U   |||||||||| ||| ||||| ||||| ||||||||| ||| |||||| |||||||||||||||||||||  |||| ||||| ||||||||||| ||   UCAGUUUAAC UAA ACGGG UGAAA GAGUUUUUU CCC UUUAAU AGGGAUAUGUAAUUUAGUUUU  GAUU GAUCA GGAAGACAAUU UU     C CC          U   A     -     U         U   A      C                     CU    U     -           G  UUUAC |
Stem-loop sequence | AGUCAAAUUGCAUUCUGCCCCAUUUUCUCAAAAAAUGGGCAAAUUAAUCCUUGUAUGUUAGAUCAAAGAGCUAAUUGGUUCUUUCUGUUAAAAAUUUCAUCCAUUUUUGUUAACAGAAGGACUAGUUUAGUCUUUUGAUUUAAUGUAUAGGGACUAAUUUACCCUUUUUUUGAGUAAAGUGGGCAAAAUUCAAUUUGACUCC |