ncRNA ID | novel_gar_miR554 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:37610679-37610757 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUGGACUUAGAUCGAGGCAAGA - 24 |
Stem-loop(if miRNA) |
--     GA     A  ---       GAAC   G  C    U   ACUUG  CUUAG UC   GAGGCAA    AAA UA UCGA U   |||||  ||||| ||   |||||||    ||| || ||||   UGAAU  GAGUC AG   UUUUGUU    UUU AU AGCU A CU     -G     -  UAU       --AC   G  C    U |
Stem-loop sequence | ACUUGGACUUAGAUCGAGGCAAGAACAAAGUACUCGAUUAUUCGACUAGUUUCAUUGUUUUUAUGACUGAGGUAAGUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017790754.1 |
|
1.0 | PREDICTED: Gossypium arboreum regulator of telomere elongation helicase 1-like (LOC108486615), mRNA | regulator of telomere elongation helicase 1-like(LOC108486615) | coding protein | psRNATarget |