ncRNA ID | novel_gar_miR554 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:37610679-37610757 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUGGACUUAGAUCGAGGCAAGA - 24 |
Stem-loop(if miRNA) |
-- GA A --- GAAC G C U ACUUG CUUAG UC GAGGCAA AAA UA UCGA U ||||| ||||| || ||||||| ||| || |||| UGAAU GAGUC AG UUUUGUU UUU AU AGCU A CU -G - UAU --AC G C U |
Stem-loop sequence | ACUUGGACUUAGAUCGAGGCAAGAACAAAGUACUCGAUUAUUCGACUAGUUUCAUUGUUUUUAUGACUGAGGUAAGUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017790754.1 |
|
1.0 | PREDICTED: Gossypium arboreum regulator of telomere elongation helicase 1-like (LOC108486615), mRNA | regulator of telomere elongation helicase 1-like(LOC108486615) | coding protein | psRNATarget |