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BaseInfo

ncRNA ID novel_gar_miR551
Species Gossypium arboreum
Class miRNA
Genome position Chr12:54417982-54418141 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 137 - UUUGGACUGUCACGUAAGACUGCC - 160
Stem-loop(if miRNA) --     C   A  GU          AA         UC     A       -UAC   ACAAUCCA    AAAUUUAUUU
  UAGUC UAC UG  AGUCCAAAUG  UUUUAAAUG  AACUU GAUGUCU    GUG        AAUU          A
  ||||| ||| ||  ||||||||||  |||||||||  ||||| |||||||    |||        ||||          A
  GUCAG AUG AC  UCAGGUUUAC  AAAAUUUAC  UUGAA CUACAGG    CGC        UUUU          U
CC     A   C  UG          CC         GA     C       UCAA   --CCCUAC    AUCCAAAAAU
Stem-loop sequence UAGUCCUACAUGGUAGUCCAAAUGAAUUUUAAAUGUCAACUUAGAUGUCUUACGUGACAAUCCAAAUUAAAUUUAUUUAAUUAAAAACCUAUUUUCAUCCCCGCAACUGGACAUCCAAGUUAGCAUUUAAAACCCAUUUGGACUGUCACGUAAGACUGCC