ncRNA ID | novel_gar_miR551 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:54417982-54418141 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 137 - UUUGGACUGUCACGUAAGACUGCC - 160 |
Stem-loop(if miRNA) |
--     C   A  GU          AA         UC     A       -UAC   ACAAUCCA    AAAUUUAUUU   UAGUC UAC UG  AGUCCAAAUG  UUUUAAAUG  AACUU GAUGUCU    GUG        AAUU          A   ||||| ||| ||  ||||||||||  |||||||||  ||||| |||||||    |||        ||||          A   GUCAG AUG AC  UCAGGUUUAC  AAAAUUUAC  UUGAA CUACAGG    CGC        UUUU          U CC     A   C  UG          CC         GA     C       UCAA   --CCCUAC    AUCCAAAAAU |
Stem-loop sequence | UAGUCCUACAUGGUAGUCCAAAUGAAUUUUAAAUGUCAACUUAGAUGUCUUACGUGACAAUCCAAAUUAAAUUUAUUUAAUUAAAAACCUAUUUUCAUCCCCGCAACUGGACAUCCAAGUUAGCAUUUAAAACCCAUUUGGACUGUCACGUAAGACUGCC |