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BaseInfo

ncRNA ID	novel_gar_miR541
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:79255237-79255415 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588;SRR1029587
Length	24
Mature sequence(if miRNA)	156 - AAUAAGAGGAUAAUGUACUUCAAC - 179
Stem-loop(if miRNA)	AAUAAG     ----              CUC     C C        U    CUAA   CAAAACUGAUGCCAACUAAGUUAAGACCCAGU       AGGAU    AAUGUACUUCAACA   UCGAA C AUGUCCUC UGCA    CAA                                U       |||||    ||||||||||||||   ||||| | |||||||| ||||    |||                                G       UCCUA    UUAUAUGAAGUUGU   AGUUU G UGCAGGAG AUGU    AUA                                G -AUUUA     CUAU              ACA     A A        U    ---A   AUGAAUAUGGAAUAAGUUAAAUUGAUUAGUUU
Stem-loop sequence	AAUAAGAGGAUAAUGUACUUCAACACUCUCGAACCCAUGUCCUCUUGCACUAACAACAAAACUGAUGCCAACUAAGUUAAGACCCAGUUGGUUUGAUUAGUUAAAUUGAAUAAGGUAUAAGUAAUAAUGUAUGAGGACGUAGAUUUGAACAUGUUGAAGUAUAUUUAUCAUCCUAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017788022.1	ncRNA:24   CAACUUCAUGUAAUAGGAGAAUAA   1   |*||||||=||||||||||*|||| targets:1335   GCUGAAGUGCAUUAUCCUCCUAUU   1358 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum esterase-like (LOC108484287), mRNA	esterase-like(LOC108484287)	coding protein	psRNATarget