ncRNA ID |
ath_circ_027513 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
5:16493644-16500468[-/-] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
find_circ/NA |
Type |
exonic |
Splice junction sequence |
CTTTGAATTCAGGAGATAATTGTTGACGCTTCGCCAAGGAAATCAAGACCTCATCGAATTGGATTCCATTAACCCTGCAAAGGATAAAATCCAAACAAAAGTTTCGATACAAAGGAAGCAACTTTGTGTTAAAGGGAACCTCTCAAATAGCTTAAGTCTGCCATCAACAATAGCTGGAACTTTCCCCATTGGGTTAATTT |
Tissues |
leaf/leaf, aerial, inflorescences |
Exon boundary |
Yes-Yes |
Splicing signals |
AC-CT |
circRNA sequence |
NA |
Genomic sequence |
CTTTGAATTCAGGAGATAATTGTTGACGCTTCGCCAAGGAAATCAAGACCTCATCGAATTGGATTCCATTAACCCTGCAAAGGATAAAATCCAAACAAAACAAAGATTCTCATGTATTAGAGAAAACAAAATTGGCTGAATCTGGAATTAACAAGGAAGTTCAACGAAATTACTTGCAGAATATGATAACAGCACGTGATGGCTGTGACATTCGATCTGCATACACTTTGAGCTTCATCATCTTCTTTTTCGTCTGATTTTGTGGATCACTGAACGGTGGTGATAATATGGACAAGAAGAGAAGTGTCTCTACAGTAGCTTGCTGTTTCTACAGTAGAGAGTAAAACACCGTGCCGTTTTTGTTTCTCTGTTGTGACCAAAGACCTCTCTAAACCGGTTGGTTAGGCTAATTGCTCCTTCTTCACCATCAAAGCAATACAATTACAAGGCAGAACCGGCCCTTAACCAGAACCAGTTGAGACTTGAGATCACAATTTTTTTTGTTTTTCTTTGAAACAGATGCATCATTTTTTGGTTATCTAGAGAACTAAATACCATTAAGTTGAAAATTGTATCATAAAGTTGACGTTAATGAAATAATCAACATTACAAAAAACTTATAATACCAACCTGTTGATTTTCTCAAAGAAACTTTCAAAAGTAATATCAAAAGCATCTCGAAATCTTTGAAACTTAGCATTTGAGTGAGTCTCCATAGACCAAACCAGCCAAAAGCTGATGAAACAATAGGGGCTTTTCTTTCATATGCTCTGATCATTCCTTTTCTTTCCTAACGTTTCATGATGTGAATTGGAAAGTGAAACAAATGTTGAACATAGATAGTGAGATAAACCTAGAGAAAATACAGAGATAAATACAATGAAACATAGCTAAAATACAGAGATGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAATGTCTTCTTTTTCAGAAAGTTGATCAGTTGTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTGCCCACAAGTTCTCAAGTCTTGATCGAGAATCGGCCGCCTCCCTTTCTTCAATCGTTGGTTTAGGAGCAACTTTATTCTCTTTTTGCTCTAATGACTTCACACCAAGAGGACGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCCAGAATCGGCCTCCCTTTCTTCAATCGTTATAATAGTAGCAACTTTCTTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATGACTTGCTCCTCTTCATCTAGAGCTATAGGCACACTCTCCGGATTAGAGCTTGAAGAATATACACGATCTCCATTATTCAACTTTGTTCTCTTTGAGCTTCCACCACCCTTAGAATTTTCAAAGGGGTACAAACTACACCATTTTTTACTGTGTCGGAGCTCCCTCCATGCATGCTCAAGTGTAAAATTACTCTTGTAATTGTTCGTGTAGACTTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTACTTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACTTTGTCGTTAAGTTTACTCCATCTTTGCTTGCAGTGACTCGGCTCTCGCTTTGGCAGATTTGCAAGTGAAGCGCTATTGTTAAAATATGCACCAATTCTCTTCCAAAAAGCGCATGCTTTATGTTCATTATCGACAATTGGATCCTTGCTAGTATTTAACCAAGCACTAATAAGAATGGCATCTTCAGCTCGACTCCATTTGCGTCTATGTTTTCTACGATCGGTTGTGTTTTGAACGAGGTTTGGATCATCACTCTTCTCACCAATAGTACTAAATTGGATACTGTATTATGGAAGATCCATGAAATTGGATGAGAAATTAAGTTTTTTCTTCCCCCGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGACATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAAAGTGAGGCATCGTCGCTTTTCTCGTATTCTCAATCCATTGTTCAACATTTTTATGAGGGCTGAGCAATCTAAGACGATCTTTATCATCCAAAACCTATAAAATTACACAAATTTTACAATCAAAAGCCATAACAGAGATAAGAAGGTAACTTTTTTGCTCCACAATGTTTGATAAAGAACATGTTTTTTTTAGTACCTGCAGCTGCGTTAGTTCACATACAAGGCTCAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAACATGGCATTGCCCTTAAGCCAAAAAGTGTCTAGAGTGGTCAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACGTATCCAGCTGAAATAACCAGAAACATGAAACTGATCATTCCTATTTGACTCTACAAACTTCTCAATACCGATATTGTTATGAATATGAAAATGTAATACCTGCACCAGGGCGTAAATTGGTGTGATGCCAATCCAAAACAGAGTGAATTCTGGCCCTTTTGGAAAGATCAGTCGGGTACCTAAAAGTAAACGAACGAATAACAAAGTAAAATGATTACACTTTGCATTTTGCAATCACGAACATGCATGTGTCAAACGAAAACTTACCAATGATCAACTACACTTGGGTATGCTGAGGAAAGATATATCAAGATAGCGTGACTGCGAAAACGGTTAAGATTATTCATAAACAATGGTTTAGATACAAAGGAAGCAACTTTGTGTTAAGAAAAAACCTCTCAGAGAGCTTAAGTTTGCCATCAACAATAGCTGGAACTTTCCCCATTGGGTTAATATCTGAGAAACAAAGACTCAAATCTCACTGTAAAGACCAAATCAAGTTTCAACTTTTATCGAAATCCGAATTCACCCATGTCAAAAAAAAACCTTTTTGCTGATTATTTATACAAACCTTTAAATTCAGGGGATAATTGTTGACGATTCGCCAAGTAAATCAATATCTCATCGAATTGGATTTCATTAACCCTTGAAACAAAAAAAAATTAGAATCAATTTTTTTTTTGTGCTGAATTGCGAATTAACAAGGAAGAAGAAGAAGGAGTTTACTTGCAGAATATGAGGACAGCACGAGATGGCTGTGACATTCGATCCGCATACACTTTGAGCTTCATCTTCTTCTTCCTCCGATTTTGTGTATCGGAAAAAGTTTTCTCTGAACGAACGGCGATAATCTGGCGAAGAAGACAAGTAGTGATCTCACAGAACCAAATTAGATTGCTGTTTCCACAATAGAGAGTAAAACATCTAAACCGGCCGGTTGGGCTAAATGCTCCTTCACCATCAAATTAATGAAGTAACAAATCATAACCGGTCCTTAACCAGAAGAGTTGAAATCACAATATTTTTCTTTCTATGAAACACATGCAATATACCAAACTACAAAATGTTTTATATTTATCGTATTTTTTTTTATCTAATGAACAAATAAACATGGACCGGAGCAAATCATAATGATAATCACATCCATGAGAGCCAACATTACAAAAAATCTCAAGTAAACTATCAAAAGTAATATCAAAAGCATCTCAAAATCTTTGAAACTTAGCATTAGAGTCTCCATATACCAAACCAGGCAAAAGCTGATGAACTATGTAACTTCTAATATCCTCTTTCTCCTTTAGAGTCTTTACCTTCACATCTTCTTGGCTTATATACACTTAAGTATTTTTGATGATTCTCCGGTTAGTGCCAAGCGTATTGATAATAAGTTGTGTATGAATTAAATATCACTGGAATGCAACAGGAGTTAGTGAATCGAAAACCGACCGATTTTTTCGTTGGACTATCTCCTCACGGTTGTAGACAGTACTCTAAGTCTTGAAATAGCTCTATGACATTCTCAGGCTTCTCGCAACTTCCGTTAGTACAGTTTAAGAACCGACTATGTTCAGAAAATGATGTGCATTGTTCGATTAGCGTTGACCGGATGCTATTAGGATTACCAGGTCTTGAACCTCTAGCAAAACTTATTAGATTCTTGCGAGGTTTTTTCATCATCTTGACTTGCCAGCTAACATTATTGAGAGGGTTTTAGGCATATGTTCGTTTGAAGAGTTTAAGAAACGAAAGAGAGAGATTTGATAGAAATCAAAGGGGATGGTAAAAGGGAGACATGAGAGAAATCAAAGGGAAGTGATGATAAAAGGAGACAGTTTCAAGTTTCCTACCTTAAGTTAAAGTGAAACAGAGAGGGAACAGTGACCTTACAGAGAAACAGAGCGAGAGTGTGAAGTTACAATGTTCGACTTCTTACGGAGAAACAAAGAGGGAACGTGTTTCCTACCTGAACTGGAGAGTGAAACAAACGTTGAACATAGTTAAGGAAGATTCAGTTAGTATCTATTTCTAGAAAAGCCGTCTATAGCCTGTCACTAAGTTGATAGTGAGATAAACATAGAGAAAATAAAGAGATAAATACAACGAGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAGTTTCTTCCTTTTCAGAAGTTTCACCTGTTCTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTAGCCACAAGTTCCCAAGTCTTGATCGAAAATTGGCTGCCTCCCTTTCTTCAATCATTGTTTTAGTAGCAACTTTCCTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCTAGAATCGGCCTCCCTTTCTTCAAGCATTGTTTTAGTAGCAACTTTCTTCTCTTTTTGCTTTGACGACTTCACACCAAGAGGGCGATCCATAACTTGCTCCTCTCCATCTAGAGCTATAGGCACACTCTCCGGATTACAGCTTGAAGAATATACACCACCTCCATTCAACTTTGTTCTCTTTGAGCTTCCACCCCCCTTAGAATTTTCAGAGGTGTATGTACTACACCATTTTTTATTGTGTCGGAGCTCCCGCCATGCATGCTCAAGTTTGAAATTACTCATGTAATTGTTGTAGTACAATTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTAGCTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACGTAGTCGTTAATTTTCCTCCATCTTTGCCTGCAGTGATTCCACTCTCGCTTTGGTAGATTTGCAAGTGAAGCGCTATTTGAAACATGTGCACCAATTCTCTTCCAAAAAGTATGTGCTTGTTGTTCATCATAAACGACAACTTTACGATCCTTACTAGTATTTAACCAAGCACTAATGAGAATGACATCGTCAGGTGGACTCCATTTGCGTCTTCGAGCTTTACGATCGGTTGTGTCTTGAACGAGGTTTGGACCATCACTCGTCCCACCAATACTACTAAATTGGATACTGTATTATGGAAGATCCATGAAACTGGATGAGAAATTAAACGGAGTGTTTGGATCTCGAATGACTTATCTTTAGGGGGAAGGAGTCTCTCATATAGAGACCCTGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGAAATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAGAGTGAGGCATTGTCGCTTTTCTCGTACTCTCAATCCATTGTTCAACTTTCTTATGAGGGCTAAGCAATCTAAGACGATCTTTGTCATCCAAAACCTATAAAATAGAATAAATTTTACAATCAAAAGTCATAACCGAGATAAGGAAGCAACTTTTTTGCTCCATAATGTTTGATATGGTTAGTTACATTGGTATTTCGATGACTTAATAAAACAAATAAAAGTTGGTAAAGAAGATGATTTTTTTGCGTACCTGCAGCTGCATAAGTTCACATACAAGGCTGAGATCAGCTATAGATGGTTGCTTGCCCCCGAGTAAAAACTTGGCACTGCCCTTAAGCCAAAAAGTCTCTAGAGTGGACAGAGAGTTTGTTAGTATGTTCTCAGCTTCAGCAGCTGCTTTCGGATTCAGTGGAAGACCAAGAGCTGGAGCTAGAACGCTATTCAGAACATATCCAGCTGAGAGATTGTTAAATAACCGTAATCAGAAACATGAAGCCTTATTTGAATATACAACTAATTAACATCGATACTGTTATGAATATAATACATGCACCAGGGCGTAAATTGGTGTGATGCCAATCCAAAACGGAGTGAATCTTGGCTCTTTTGGAAAGATCATTCGGGTACCTAAAAGTAAAATGATTACACTTTGCAATCAAGTACATGCATGTGTCAAACGAAGTAGAGAAACTTACCAATGATCAACTACACTTGCGTATGCTGAGGAAAGATATATCAATATAGCGTGACTGCGAGAAGAAGAAACAGACAAACGGTTAAGATTATTCATAAACAATGGTGTTTCGATACAAAGGAAGCAACTTTGTGTTAAAGGGAACCTCTCAAATAGCTTAAGTCTGCCATCAACAATAGCTGGAACTTTCCCCATTGGGTTAATTT 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