Search result

BaseInfo

ncRNA ID	ath_circ_027510
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:16493133-16500024[-/-]
Reference genome	TAIR10
Source	PlantcircBase
Method	find_circ/NA
Type	exonic
Splice junction sequence	CTGCACCACGACGTAAATTGGTGTGATGCCAATCCAAAACTGAGTGAATCTTGGCTCTTTTGGATAGATCATTTGGATACCTAAAAGTAAACAAATGAACGACAGAGAGTTTGTTAGTATGTTCTCAGCTTCAGCAGCTGCTTTCGGATTCAGTGGAAGACCAAGAGCTGGAGCTAGAACGCTATTCAGAACATATCCAG
Tissues	leaf/inflorescences
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTGCACCACGACGTAAATTGGTGTGATGCCAATCCAAAACTGAGTGAATCTTGGCTCTTTTGGATAGATCATTTGGATACCTAAAAGTAAACAAATGAACATCAAAGCAAAATGATTACACTTTGTGTCAAACGAAGTAGAAACTTACCAATGATCAGCAACACTTGGAAACGCCGAGGATAGATATATCAGGATTGCGTGACTACGAAAAGAATCAACGGTTAAGATTCATAAAAAATGGTCAATAAACCAAAGCAAGAACCCAAAAGAGAATGAACTTTTGTGTTAACCTCTCAAAGAGCTTAAGCCTGCCATCAACAATAGCTGGAACTTTCCCCAATGGGTTAATATCTGAAGAACAAGACACATTTCTTAACAATATTTACATTAAGAAACAACACTAAGCATATATAGCCTTAGTCTACACTAATCTACACTAATGATCTCATATACACTAAACATAAATCTACCAATACTCAGATTTGAAACTTTGTTGATTATTTGTACGAACCTTTGAATTCAGGAGATAATTGTTGACGCTTCGCCAAGGAAATCAAGACCTCATCGAATTGGATTCCATTAACCCTGCAAAGGATAAAATCCAAACAAAACAAAGATTCTCATGTATTAGAGAAAACAAAATTGGCTGAATCTGGAATTAACAAGGAAGTTCAACGAAATTACTTGCAGAATATGATAACAGCACGTGATGGCTGTGACATTCGATCTGCATACACTTTGAGCTTCATCATCTTCTTTTTCGTCTGATTTTGTGGATCACTGAACGGTGGTGATAATATGGACAAGAAGAGAAGTGTCTCTACAGTAGCTTGCTGTTTCTACAGTAGAGAGTAAAACACCGTGCCGTTTTTGTTTCTCTGTTGTGACCAAAGACCTCTCTAAACCGGTTGGTTAGGCTAATTGCTCCTTCTTCACCATCAAAGCAATACAATTACAAGGCAGAACCGGCCCTTAACCAGAACCAGTTGAGACTTGAGATCACAATTTTTTTTGTTTTTCTTTGAAACAGATGCATCATTTTTTGGTTATCTAGAGAACTAAATACCATTAAGTTGAAAATTGTATCATAAAGTTGACGTTAATGAAATAATCAACATTACAAAAAACTTATAATACCAACCTGTTGATTTTCTCAAAGAAACTTTCAAAAGTAATATCAAAAGCATCTCGAAATCTTTGAAACTTAGCATTTGAGTGAGTCTCCATAGACCAAACCAGCCAAAAGCTGATGAAACAATAGGGGCTTTTCTTTCATATGCTCTGATCATTCCTTTTCTTTCCTAACGTTTCATGATGTGAATTGGAAAGTGAAACAAATGTTGAACATAGATAGTGAGATAAACCTAGAGAAAATACAGAGATAAATACAATGAAACATAGCTAAAATACAGAGATGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAATGTCTTCTTTTTCAGAAAGTTGATCAGTTGTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTGCCCACAAGTTCTCAAGTCTTGATCGAGAATCGGCCGCCTCCCTTTCTTCAATCGTTGGTTTAGGAGCAACTTTATTCTCTTTTTGCTCTAATGACTTCACACCAAGAGGACGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCCAGAATCGGCCTCCCTTTCTTCAATCGTTATAATAGTAGCAACTTTCTTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATGACTTGCTCCTCTTCATCTAGAGCTATAGGCACACTCTCCGGATTAGAGCTTGAAGAATATACACGATCTCCATTATTCAACTTTGTTCTCTTTGAGCTTCCACCACCCTTAGAATTTTCAAAGGGGTACAAACTACACCATTTTTTACTGTGTCGGAGCTCCCTCCATGCATGCTCAAGTGTAAAATTACTCTTGTAATTGTTCGTGTAGACTTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTACTTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACTTTGTCGTTAAGTTTACTCCATCTTTGCTTGCAGTGACTCGGCTCTCGCTTTGGCAGATTTGCAAGTGAAGCGCTATTGTTAAAATATGCACCAATTCTCTTCCAAAAAGCGCATGCTTTATGTTCATTATCGACAATTGGATCCTTGCTAGTATTTAACCAAGCACTAATAAGAATGGCATCTTCAGCTCGACTCCATTTGCGTCTATGTTTTCTACGATCGGTTGTGTTTTGAACGAGGTTTGGATCATCACTCTTCTCACCAATAGTACTAAATTGGATACTGTATTATGGAAGATCCATGAAATTGGATGAGAAATTAAGTTTTTTCTTCCCCCGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGACATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAAAGTGAGGCATCGTCGCTTTTCTCGTATTCTCAATCCATTGTTCAACATTTTTATGAGGGCTGAGCAATCTAAGACGATCTTTATCATCCAAAACCTATAAAATTACACAAATTTTACAATCAAAAGCCATAACAGAGATAAGAAGGTAACTTTTTTGCTCCACAATGTTTGATAAAGAACATGTTTTTTTTAGTACCTGCAGCTGCGTTAGTTCACATACAAGGCTCAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAACATGGCATTGCCCTTAAGCCAAAAAGTGTCTAGAGTGGTCAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACGTATCCAGCTGAAATAACCAGAAACATGAAACTGATCATTCCTATTTGACTCTACAAACTTCTCAATACCGATATTGTTATGAATATGAAAATGTAATACCTGCACCAGGGCGTAAATTGGTGTGATGCCAATCCAAAACAGAGTGAATTCTGGCCCTTTTGGAAAGATCAGTCGGGTACCTAAAAGTAAACGAACGAATAACAAAGTAAAATGATTACACTTTGCATTTTGCAATCACGAACATGCATGTGTCAAACGAAAACTTACCAATGATCAACTACACTTGGGTATGCTGAGGAAAGATATATCAAGATAGCGTGACTGCGAAAACGGTTAAGATTATTCATAAACAATGGTTTAGATACAAAGGAAGCAACTTTGTGTTAAGAAAAAACCTCTCAGAGAGCTTAAGTTTGCCATCAACAATAGCTGGAACTTTCCCCATTGGGTTAATATCTGAGAAACAAAGACTCAAATCTCACTGTAAAGACCAAATCAAGTTTCAACTTTTATCGAAATCCGAATTCACCCATGTCAAAAAAAAACCTTTTTGCTGATTATTTATACAAACCTTTAAATTCAGGGGATAATTGTTGACGATTCGCCAAGTAAATCAATATCTCATCGAATTGGATTTCATTAACCCTTGAAACAAAAAAAAATTAGAATCAATTTTTTTTTTGTGCTGAATTGCGAATTAACAAGGAAGAAGAAGAAGGAGTTTACTTGCAGAATATGAGGACAGCACGAGATGGCTGTGACATTCGATCCGCATACACTTTGAGCTTCATCTTCTTCTTCCTCCGATTTTGTGTATCGGAAAAAGTTTTCTCTGAACGAACGGCGATAATCTGGCGAAGAAGACAAGTAGTGATCTCACAGAACCAAATTAGATTGCTGTTTCCACAATAGAGAGTAAAACATCTAAACCGGCCGGTTGGGCTAAATGCTCCTTCACCATCAAATTAATGAAGTAACAAATCATAACCGGTCCTTAACCAGAAGAGTTGAAATCACAATATTTTTCTTTCTATGAAACACATGCAATATACCAAACTACAAAATGTTTTATATTTATCGTATTTTTTTTTATCTAATGAACAAATAAACATGGACCGGAGCAAATCATAATGATAATCACATCCATGAGAGCCAACATTACAAAAAATCTCAAGTAAACTATCAAAAGTAATATCAAAAGCATCTCAAAATCTTTGAAACTTAGCATTAGAGTCTCCATATACCAAACCAGGCAAAAGCTGATGAACTATGTAACTTCTAATATCCTCTTTCTCCTTTAGAGTCTTTACCTTCACATCTTCTTGGCTTATATACACTTAAGTATTTTTGATGATTCTCCGGTTAGTGCCAAGCGTATTGATAATAAGTTGTGTATGAATTAAATATCACTGGAATGCAACAGGAGTTAGTGAATCGAAAACCGACCGATTTTTTCGTTGGACTATCTCCTCACGGTTGTAGACAGTACTCTAAGTCTTGAAATAGCTCTATGACATTCTCAGGCTTCTCGCAACTTCCGTTAGTACAGTTTAAGAACCGACTATGTTCAGAAAATGATGTGCATTGTTCGATTAGCGTTGACCGGATGCTATTAGGATTACCAGGTCTTGAACCTCTAGCAAAACTTATTAGATTCTTGCGAGGTTTTTTCATCATCTTGACTTGCCAGCTAACATTATTGAGAGGGTTTTAGGCATATGTTCGTTTGAAGAGTTTAAGAAACGAAAGAGAGAGATTTGATAGAAATCAAAGGGGATGGTAAAAGGGAGACATGAGAGAAATCAAAGGGAAGTGATGATAAAAGGAGACAGTTTCAAGTTTCCTACCTTAAGTTAAAGTGAAACAGAGAGGGAACAGTGACCTTACAGAGAAACAGAGCGAGAGTGTGAAGTTACAATGTTCGACTTCTTACGGAGAAACAAAGAGGGAACGTGTTTCCTACCTGAACTGGAGAGTGAAACAAACGTTGAACATAGTTAAGGAAGATTCAGTTAGTATCTATTTCTAGAAAAGCCGTCTATAGCCTGTCACTAAGTTGATAGTGAGATAAACATAGAGAAAATAAAGAGATAAATACAACGAGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAGTTTCTTCCTTTTCAGAAGTTTCACCTGTTCTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTAGCCACAAGTTCCCAAGTCTTGATCGAAAATTGGCTGCCTCCCTTTCTTCAATCATTGTTTTAGTAGCAACTTTCCTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCTAGAATCGGCCTCCCTTTCTTCAAGCATTGTTTTAGTAGCAACTTTCTTCTCTTTTTGCTTTGACGACTTCACACCAAGAGGGCGATCCATAACTTGCTCCTCTCCATCTAGAGCTATAGGCACACTCTCCGGATTACAGCTTGAAGAATATACACCACCTCCATTCAACTTTGTTCTCTTTGAGCTTCCACCCCCCTTAGAATTTTCAGAGGTGTATGTACTACACCATTTTTTATTGTGTCGGAGCTCCCGCCATGCATGCTCAAGTTTGAAATTACTCATGTAATTGTTGTAGTACAATTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTAGCTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACGTAGTCGTTAATTTTCCTCCATCTTTGCCTGCAGTGATTCCACTCTCGCTTTGGTAGATTTGCAAGTGAAGCGCTATTTGAAACATGTGCACCAATTCTCTTCCAAAAAGTATGTGCTTGTTGTTCATCATAAACGACAACTTTACGATCCTTACTAGTATTTAACCAAGCACTAATGAGAATGACATCGTCAGGTGGACTCCATTTGCGTCTTCGAGCTTTACGATCGGTTGTGTCTTGAACGAGGTTTGGACCATCACTCGTCCCACCAATACTACTAAATTGGATACTGTATTATGGAAGATCCATGAAACTGGATGAGAAATTAAACGGAGTGTTTGGATCTCGAATGACTTATCTTTAGGGGGAAGGAGTCTCTCATATAGAGACCCTGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGAAATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAGAGTGAGGCATTGTCGCTTTTCTCGTACTCTCAATCCATTGTTCAACTTTCTTATGAGGGCTAAGCAATCTAAGACGATCTTTGTCATCCAAAACCTATAAAATAGAATAAATTTTACAATCAAAAGTCATAACCGAGATAAGGAAGCAACTTTTTTGCTCCATAATGTTTGATATGGTTAGTTACATTGGTATTTCGATGACTTAATAAAACAAATAAAAGTTGGTAAAGAAGATGATTTTTTTGCGTACCTGCAGCTGCATAAGTTCACATACAAGGCTGAGATCAGCTATAGATGGTTGCTTGCCCCCGAGTAAAAACTTGGCACTGCCCTTAAGCCAAAAAGTCTCTAGAGTGGACAGAGAGTTTGTTAGTATGTTCTCAGCTTCAGCAGCTGCTTTCGGATTCAGTGGAAGACCAAGAGCTGGAGCTAGAACGCTATTCAGAACATATCCAG