Search result

BaseInfo

ncRNA ID ath_circ_027509
Species Arabidopsis thaliana
Class circRNA
Genome position 5:16493133-16496185[-/-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CTGCACCACGACGTAAATTGGTGTGATGCCAATCCAAAACTGAGTGAATCTTGGCTCTTTTGGATAGATCATTTGGATACCTAAAAGTAAACAAATGAACGTCAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACGTATCCAG
Tissues leaf/leaf, aerial, inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTGCACCACGACGTAAATTGGTGTGATGCCAATCCAAAACTGAGTGAATCTTGGCTCTTTTGGATAGATCATTTGGATACCTAAAAGTAAACAAATGAACATCAAAGCAAAATGATTACACTTTGTGTCAAACGAAGTAGAAACTTACCAATGATCAGCAACACTTGGAAACGCCGAGGATAGATATATCAGGATTGCGTGACTACGAAAAGAATCAACGGTTAAGATTCATAAAAAATGGTCAATAAACCAAAGCAAGAACCCAAAAGAGAATGAACTTTTGTGTTAACCTCTCAAAGAGCTTAAGCCTGCCATCAACAATAGCTGGAACTTTCCCCAATGGGTTAATATCTGAAGAACAAGACACATTTCTTAACAATATTTACATTAAGAAACAACACTAAGCATATATAGCCTTAGTCTACACTAATCTACACTAATGATCTCATATACACTAAACATAAATCTACCAATACTCAGATTTGAAACTTTGTTGATTATTTGTACGAACCTTTGAATTCAGGAGATAATTGTTGACGCTTCGCCAAGGAAATCAAGACCTCATCGAATTGGATTCCATTAACCCTGCAAAGGATAAAATCCAAACAAAACAAAGATTCTCATGTATTAGAGAAAACAAAATTGGCTGAATCTGGAATTAACAAGGAAGTTCAACGAAATTACTTGCAGAATATGATAACAGCACGTGATGGCTGTGACATTCGATCTGCATACACTTTGAGCTTCATCATCTTCTTTTTCGTCTGATTTTGTGGATCACTGAACGGTGGTGATAATATGGACAAGAAGAGAAGTGTCTCTACAGTAGCTTGCTGTTTCTACAGTAGAGAGTAAAACACCGTGCCGTTTTTGTTTCTCTGTTGTGACCAAAGACCTCTCTAAACCGGTTGGTTAGGCTAATTGCTCCTTCTTCACCATCAAAGCAATACAATTACAAGGCAGAACCGGCCCTTAACCAGAACCAGTTGAGACTTGAGATCACAATTTTTTTTGTTTTTCTTTGAAACAGATGCATCATTTTTTGGTTATCTAGAGAACTAAATACCATTAAGTTGAAAATTGTATCATAAAGTTGACGTTAATGAAATAATCAACATTACAAAAAACTTATAATACCAACCTGTTGATTTTCTCAAAGAAACTTTCAAAAGTAATATCAAAAGCATCTCGAAATCTTTGAAACTTAGCATTTGAGTGAGTCTCCATAGACCAAACCAGCCAAAAGCTGATGAAACAATAGGGGCTTTTCTTTCATATGCTCTGATCATTCCTTTTCTTTCCTAACGTTTCATGATGTGAATTGGAAAGTGAAACAAATGTTGAACATAGATAGTGAGATAAACCTAGAGAAAATACAGAGATAAATACAATGAAACATAGCTAAAATACAGAGATGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAATGTCTTCTTTTTCAGAAAGTTGATCAGTTGTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTGCCCACAAGTTCTCAAGTCTTGATCGAGAATCGGCCGCCTCCCTTTCTTCAATCGTTGGTTTAGGAGCAACTTTATTCTCTTTTTGCTCTAATGACTTCACACCAAGAGGACGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCCAGAATCGGCCTCCCTTTCTTCAATCGTTATAATAGTAGCAACTTTCTTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATGACTTGCTCCTCTTCATCTAGAGCTATAGGCACACTCTCCGGATTAGAGCTTGAAGAATATACACGATCTCCATTATTCAACTTTGTTCTCTTTGAGCTTCCACCACCCTTAGAATTTTCAAAGGGGTACAAACTACACCATTTTTTACTGTGTCGGAGCTCCCTCCATGCATGCTCAAGTGTAAAATTACTCTTGTAATTGTTCGTGTAGACTTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTACTTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACTTTGTCGTTAAGTTTACTCCATCTTTGCTTGCAGTGACTCGGCTCTCGCTTTGGCAGATTTGCAAGTGAAGCGCTATTGTTAAAATATGCACCAATTCTCTTCCAAAAAGCGCATGCTTTATGTTCATTATCGACAATTGGATCCTTGCTAGTATTTAACCAAGCACTAATAAGAATGGCATCTTCAGCTCGACTCCATTTGCGTCTATGTTTTCTACGATCGGTTGTGTTTTGAACGAGGTTTGGATCATCACTCTTCTCACCAATAGTACTAAATTGGATACTGTATTATGGAAGATCCATGAAATTGGATGAGAAATTAAGTTTTTTCTTCCCCCGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGACATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAAAGTGAGGCATCGTCGCTTTTCTCGTATTCTCAATCCATTGTTCAACATTTTTATGAGGGCTGAGCAATCTAAGACGATCTTTATCATCCAAAACCTATAAAATTACACAAATTTTACAATCAAAAGCCATAACAGAGATAAGAAGGTAACTTTTTTGCTCCACAATGTTTGATAAAGAACATGTTTTTTTTAGTACCTGCAGCTGCGTTAGTTCACATACAAGGCTCAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAACATGGCATTGCCCTTAAGCCAAAAAGTGTCTAGAGTGGTCAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACGTATCCAG