Search result

BaseInfo

ncRNA ID ath_circ_027507
Species Arabidopsis thaliana
Class circRNA
Genome position 5:16492848-16499662[-/-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CTGCAGCTGCATAAGTTCGCATACAAGGCTGAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAATTTAGCATTGCCCTTAAGCCAAAAAGTCTCTCATCAGAGTGAGGCATTGTCGCTTTTCTCGTACTCTCAATCCATTGTTCAACTTTCTTATGAGGGCTAAGCAATCTAAGACGATCTTTGTCATCCAAAAC
Tissues leaf/root, aerial, inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTGCAGCTGCATAAGTTCGCATACAAGGCTGAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAATTTAGCATTGCCCTTAAGCCAAAAAGTCTCTAGAGTGGACAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACATATCCAGCTGCAACAGTAAAAACAACCGTAATCAGAACTATTTGACTCTATAACTTCTCAACATCGATGAATATAATGTACAATACCTGCACCACGACGTAAATTGGTGTGATGCCAATCCAAAACTGAGTGAATCTTGGCTCTTTTGGATAGATCATTTGGATACCTAAAAGTAAACAAATGAACATCAAAGCAAAATGATTACACTTTGTGTCAAACGAAGTAGAAACTTACCAATGATCAGCAACACTTGGAAACGCCGAGGATAGATATATCAGGATTGCGTGACTACGAAAAGAATCAACGGTTAAGATTCATAAAAAATGGTCAATAAACCAAAGCAAGAACCCAAAAGAGAATGAACTTTTGTGTTAACCTCTCAAAGAGCTTAAGCCTGCCATCAACAATAGCTGGAACTTTCCCCAATGGGTTAATATCTGAAGAACAAGACACATTTCTTAACAATATTTACATTAAGAAACAACACTAAGCATATATAGCCTTAGTCTACACTAATCTACACTAATGATCTCATATACACTAAACATAAATCTACCAATACTCAGATTTGAAACTTTGTTGATTATTTGTACGAACCTTTGAATTCAGGAGATAATTGTTGACGCTTCGCCAAGGAAATCAAGACCTCATCGAATTGGATTCCATTAACCCTGCAAAGGATAAAATCCAAACAAAACAAAGATTCTCATGTATTAGAGAAAACAAAATTGGCTGAATCTGGAATTAACAAGGAAGTTCAACGAAATTACTTGCAGAATATGATAACAGCACGTGATGGCTGTGACATTCGATCTGCATACACTTTGAGCTTCATCATCTTCTTTTTCGTCTGATTTTGTGGATCACTGAACGGTGGTGATAATATGGACAAGAAGAGAAGTGTCTCTACAGTAGCTTGCTGTTTCTACAGTAGAGAGTAAAACACCGTGCCGTTTTTGTTTCTCTGTTGTGACCAAAGACCTCTCTAAACCGGTTGGTTAGGCTAATTGCTCCTTCTTCACCATCAAAGCAATACAATTACAAGGCAGAACCGGCCCTTAACCAGAACCAGTTGAGACTTGAGATCACAATTTTTTTTGTTTTTCTTTGAAACAGATGCATCATTTTTTGGTTATCTAGAGAACTAAATACCATTAAGTTGAAAATTGTATCATAAAGTTGACGTTAATGAAATAATCAACATTACAAAAAACTTATAATACCAACCTGTTGATTTTCTCAAAGAAACTTTCAAAAGTAATATCAAAAGCATCTCGAAATCTTTGAAACTTAGCATTTGAGTGAGTCTCCATAGACCAAACCAGCCAAAAGCTGATGAAACAATAGGGGCTTTTCTTTCATATGCTCTGATCATTCCTTTTCTTTCCTAACGTTTCATGATGTGAATTGGAAAGTGAAACAAATGTTGAACATAGATAGTGAGATAAACCTAGAGAAAATACAGAGATAAATACAATGAAACATAGCTAAAATACAGAGATGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAATGTCTTCTTTTTCAGAAAGTTGATCAGTTGTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTGCCCACAAGTTCTCAAGTCTTGATCGAGAATCGGCCGCCTCCCTTTCTTCAATCGTTGGTTTAGGAGCAACTTTATTCTCTTTTTGCTCTAATGACTTCACACCAAGAGGACGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCCAGAATCGGCCTCCCTTTCTTCAATCGTTATAATAGTAGCAACTTTCTTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATGACTTGCTCCTCTTCATCTAGAGCTATAGGCACACTCTCCGGATTAGAGCTTGAAGAATATACACGATCTCCATTATTCAACTTTGTTCTCTTTGAGCTTCCACCACCCTTAGAATTTTCAAAGGGGTACAAACTACACCATTTTTTACTGTGTCGGAGCTCCCTCCATGCATGCTCAAGTGTAAAATTACTCTTGTAATTGTTCGTGTAGACTTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTACTTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACTTTGTCGTTAAGTTTACTCCATCTTTGCTTGCAGTGACTCGGCTCTCGCTTTGGCAGATTTGCAAGTGAAGCGCTATTGTTAAAATATGCACCAATTCTCTTCCAAAAAGCGCATGCTTTATGTTCATTATCGACAATTGGATCCTTGCTAGTATTTAACCAAGCACTAATAAGAATGGCATCTTCAGCTCGACTCCATTTGCGTCTATGTTTTCTACGATCGGTTGTGTTTTGAACGAGGTTTGGATCATCACTCTTCTCACCAATAGTACTAAATTGGATACTGTATTATGGAAGATCCATGAAATTGGATGAGAAATTAAGTTTTTTCTTCCCCCGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGACATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAAAGTGAGGCATCGTCGCTTTTCTCGTATTCTCAATCCATTGTTCAACATTTTTATGAGGGCTGAGCAATCTAAGACGATCTTTATCATCCAAAACCTATAAAATTACACAAATTTTACAATCAAAAGCCATAACAGAGATAAGAAGGTAACTTTTTTGCTCCACAATGTTTGATAAAGAACATGTTTTTTTTAGTACCTGCAGCTGCGTTAGTTCACATACAAGGCTCAGATCAGCTATAGATGGTTGGTTGCTTCCGAGCAAGAACATGGCATTGCCCTTAAGCCAAAAAGTGTCTAGAGTGGTCAGAGACTTTGTTAGTAACTGCTCAGCTTCAGCAGCTGCTTTCGGATTCAGAGGAAGACCGAGAGCTGGACCTAGTACACTATTCAGAACGTATCCAGCTGAAATAACCAGAAACATGAAACTGATCATTCCTATTTGACTCTACAAACTTCTCAATACCGATATTGTTATGAATATGAAAATGTAATACCTGCACCAGGGCGTAAATTGGTGTGATGCCAATCCAAAACAGAGTGAATTCTGGCCCTTTTGGAAAGATCAGTCGGGTACCTAAAAGTAAACGAACGAATAACAAAGTAAAATGATTACACTTTGCATTTTGCAATCACGAACATGCATGTGTCAAACGAAAACTTACCAATGATCAACTACACTTGGGTATGCTGAGGAAAGATATATCAAGATAGCGTGACTGCGAAAACGGTTAAGATTATTCATAAACAATGGTTTAGATACAAAGGAAGCAACTTTGTGTTAAGAAAAAACCTCTCAGAGAGCTTAAGTTTGCCATCAACAATAGCTGGAACTTTCCCCATTGGGTTAATATCTGAGAAACAAAGACTCAAATCTCACTGTAAAGACCAAATCAAGTTTCAACTTTTATCGAAATCCGAATTCACCCATGTCAAAAAAAAACCTTTTTGCTGATTATTTATACAAACCTTTAAATTCAGGGGATAATTGTTGACGATTCGCCAAGTAAATCAATATCTCATCGAATTGGATTTCATTAACCCTTGAAACAAAAAAAAATTAGAATCAATTTTTTTTTTGTGCTGAATTGCGAATTAACAAGGAAGAAGAAGAAGGAGTTTACTTGCAGAATATGAGGACAGCACGAGATGGCTGTGACATTCGATCCGCATACACTTTGAGCTTCATCTTCTTCTTCCTCCGATTTTGTGTATCGGAAAAAGTTTTCTCTGAACGAACGGCGATAATCTGGCGAAGAAGACAAGTAGTGATCTCACAGAACCAAATTAGATTGCTGTTTCCACAATAGAGAGTAAAACATCTAAACCGGCCGGTTGGGCTAAATGCTCCTTCACCATCAAATTAATGAAGTAACAAATCATAACCGGTCCTTAACCAGAAGAGTTGAAATCACAATATTTTTCTTTCTATGAAACACATGCAATATACCAAACTACAAAATGTTTTATATTTATCGTATTTTTTTTTATCTAATGAACAAATAAACATGGACCGGAGCAAATCATAATGATAATCACATCCATGAGAGCCAACATTACAAAAAATCTCAAGTAAACTATCAAAAGTAATATCAAAAGCATCTCAAAATCTTTGAAACTTAGCATTAGAGTCTCCATATACCAAACCAGGCAAAAGCTGATGAACTATGTAACTTCTAATATCCTCTTTCTCCTTTAGAGTCTTTACCTTCACATCTTCTTGGCTTATATACACTTAAGTATTTTTGATGATTCTCCGGTTAGTGCCAAGCGTATTGATAATAAGTTGTGTATGAATTAAATATCACTGGAATGCAACAGGAGTTAGTGAATCGAAAACCGACCGATTTTTTCGTTGGACTATCTCCTCACGGTTGTAGACAGTACTCTAAGTCTTGAAATAGCTCTATGACATTCTCAGGCTTCTCGCAACTTCCGTTAGTACAGTTTAAGAACCGACTATGTTCAGAAAATGATGTGCATTGTTCGATTAGCGTTGACCGGATGCTATTAGGATTACCAGGTCTTGAACCTCTAGCAAAACTTATTAGATTCTTGCGAGGTTTTTTCATCATCTTGACTTGCCAGCTAACATTATTGAGAGGGTTTTAGGCATATGTTCGTTTGAAGAGTTTAAGAAACGAAAGAGAGAGATTTGATAGAAATCAAAGGGGATGGTAAAAGGGAGACATGAGAGAAATCAAAGGGAAGTGATGATAAAAGGAGACAGTTTCAAGTTTCCTACCTTAAGTTAAAGTGAAACAGAGAGGGAACAGTGACCTTACAGAGAAACAGAGCGAGAGTGTGAAGTTACAATGTTCGACTTCTTACGGAGAAACAAAGAGGGAACGTGTTTCCTACCTGAACTGGAGAGTGAAACAAACGTTGAACATAGTTAAGGAAGATTCAGTTAGTATCTATTTCTAGAAAAGCCGTCTATAGCCTGTCACTAAGTTGATAGTGAGATAAACATAGAGAAAATAAAGAGATAAATACAACGAGAACATAGAGATTAGAGCATCTCATCAATGAGCTTGTTCTTCAAAGTTTCTTCCTTTTCAGAAGTTTCACCTGTTCTTCTTCCAAGAAGACTTTTAAGGACTTCCATCCTTGTTAGTTTCTTTTGCTCTTCTATGTCTTTCTCCTTCAGTGCCCACAAGTTCTCAAGTCTTGATCGGGAATCTGCCTCCCTTTCTTCTTTCTCCTTTAGTAGCCACAAGTTCCCAAGTCTTGATCGAAAATTGGCTGCCTCCCTTTCTTCAATCATTGTTTTAGTAGCAACTTTCCTCTCTTTCTGCTTCGATGACTTCACACCAAGAGGAAGATCCATAACTTGCTCCTCTTCATCTAGTACCCACAAGTTCTCAAGTCTTGATCTAGAATCGGCCTCCCTTTCTTCAAGCATTGTTTTAGTAGCAACTTTCTTCTCTTTTTGCTTTGACGACTTCACACCAAGAGGGCGATCCATAACTTGCTCCTCTCCATCTAGAGCTATAGGCACACTCTCCGGATTACAGCTTGAAGAATATACACCACCTCCATTCAACTTTGTTCTCTTTGAGCTTCCACCCCCCTTAGAATTTTCAGAGGTGTATGTACTACACCATTTTTTATTGTGTCGGAGCTCCCGCCATGCATGCTCAAGTTTGAAATTACTCATGTAATTGTTGTAGTACAATTGGTATGCAACTTGGAAAACATCATCTTCAGATTGACCACTAGCTCTTTGATTCAAAGCTTGATCATAACATCCAACAAATTTGCAGACGTAGTCGTTAATTTTCCTCCATCTTTGCCTGCAGTGATTCCACTCTCGCTTTGGTAGATTTGCAAGTGAAGCGCTATTTGAAACATGTGCACCAATTCTCTTCCAAAAAGTATGTGCTTGTTGTTCATCATAAACGACAACTTTACGATCCTTACTAGTATTTAACCAAGCACTAATGAGAATGACATCGTCAGGTGGACTCCATTTGCGTCTTCGAGCTTTACGATCGGTTGTGTCTTGAACGAGGTTTGGACCATCACTCGTCCCACCAATACTACTAAATTGGATACTGTATTATGGAAGATCCATGAAACTGGATGAGAAATTAAACGGAGTGTTTGGATCTCGAATGACTTATCTTTAGGGGGAAGGAGTCTCTCATATAGAGACCCTGATGAAAGTGGTCAAGTTTTTTGTTCTTACATCTTAGATTGAGGACCCGGTTTAGATGCGGTTGCCATCTCTCGCTGCTTCTGAAATCTATCTTTGGCTCTGAAAAGGACCTCATGGACCTCATCAGAGTGAGGCATTGTCGCTTTTCTCGTACTCTCAATCCATTGTTCAACTTTCTTATGAGGGCTAAGCAATCTAAGACGATCTTTGTCATCCAAAAC