| ncRNA ID | novel_gar_miR539 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:48752810-48752961 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 129 - AACGUGUCAGCUGCGUGGCAAUUC - 152 |
| Stem-loop(if miRNA) |
--AUUA UG A C C A UUAAAAAA UU U -AU UA UUAUG G UGACAUGU AA AUUUAAUUA UUUUUUAAAAU UAAA UUAUUA AA UUUA C ||||| | |||||||| || ||||||||| ||||||||||| |||| |||||| || |||| U GGUGC C ACUGUGCA UU UAAAUUAAU AAAAAAUUUUA AUUU AGUAAU UU AAAU U CUUAAC GU G A A G -------- UU U GAU UU |
| Stem-loop sequence | AUUAUUAUGUGGAUGACAUGUCAACAUUUAAUUAAUUUUUUAAAAUUUAAAAAAUAAAUUUUAUUAUAAAUUUUAUACUUUUUAAAUAGUUUUAAUGAUUUUUAAUUUUAAAAAAGUAAUUAAAUAUUAACGUGUCAGCUGCGUGGCAAUUC |