Search result

BaseInfo

ncRNA ID ath_circ_027499
Species Arabidopsis thaliana
Class circRNA
Genome position 5:16458850-16462792[-/-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CAGGTAAGTAGAGAAGAAGAGGAGATTCAGGAGCACGTGCGCCACATTCCAACGGTGAGAACCACCGTGGCGGACCACCATCTCCGCCGTCTGAATTAACATCTTAGGCTCTAAGGTAATAAAGAAGATTGAATCAAACAAGACTTACTCTCCAAGCCTCTTATGCTGGCGAATGAGCCCTAATCCAGTACCATCGATCC
Tissues leaf/leaf, inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CAGGTAAGTAGAGAAGAAGAGGAGATTCAGGAGCACGTGCGCCACATTCCAACGGTGAGAACCACCGTGGCGGACCACCATCTCCGCCGTCTGAATTAACGAAATCTCCAGCTTCCGTTAAAAAATCCGTCAAACTCTTCCGTTCCTCAGGCCGTACTTCCTCTGTATACGAATACGGATTCACCGTCACCTTCAACTTCCCGCCGATTCCGAATTTCGGATTCGTAAGTCGTTGGGTTGAATTCGAGTAGAGAAAATGGAGATTATAAGCCTTTGTCGAAGCTGAGGAGAAGAAGGTGGGAGAGGTTCCATCAGTGAAACGAACAGTAGTAGTAGTAATAATCGCCATAGACGATCAGAGAAAGTTGGAAGAAGGTTTTTGTTGTTTAGCTTCTTCATCTCTGATAGGTCGAACACGACAAGCTCGTGCACACGAGAAAAACGATTATAATATGCCACGTTGATTTTTTCAGTTTGAATATTTTCAAATTTGATAAATTTGCTTAAATTAAACACGACAAGCTGGTTCGGTTTGGTTAAACCAAATCTGGGTTAGTTTAACTATTTATTAATAAAACTAACCTCGAATATTACACAGTTTATTGTACATTGCAATATTCTTCACCCAACACTCCCAAAAGTTACTCAATTCTATTAAAATAGAAAATAGTCAAAATACACAAACCTTCAAGGCTTCAACGTAAACGTTCTAGATATGTTGTAAGAACACAAACTTGCATGAATTTTTAACATAACACCCCGAACTTACTCAATTTCTACATCAACAGCCTTGTACTTTTAGAAGTTACAATAACATATCCAAATTCCACAAAGTTAATTAAGTCACAAATCCAGTAACTAAAATTATTGATTTCGGAGGTCAAAGGTTGGGACTTGGGAAGAGAAACCATGTGAGAAGTGATAGAGGGACCTCGCTAAAATGTTTCTATAAGGATCACCTTCTCTTTTGATCTTCAAATAGGTCATACATCTTTCTACCTCAGACTTGACCTGCAAGTAAACCTCATGAGCTTTCTCTTTATCATTTAGCTCGTCCTCTCTACCTTCTGTGTAAATTGGTTTCCCAAAGTATACGTAAAACCGTCCCGGCATCTTGGGAACTATTCCAGGCATATGCAAATCTTGGTTTCCTACTTCTCCTTCTTCACCGTTCCTAAACATATATTATCATCATTCCAATGTTATATAACATTCATATAATTACATTTAACAGAGAGTCGAAAACAAAACAAAGAAACAAAAACTAAATACCTCAAGTAAGTAGAGTCTTGTGATAACTCTTTTATAAGATTCTTCAGGAAAGGGATCTTCATTTGATCATTGTAATCGAAGACCACCTGAGAATCAATTCCATTTTTCAAAAGAGTTTTAAAGAATTCCAGATACTGAAACGAAAACGAAGAAGAAGAGATTTTGCTTACTTCACAGAGATCATCTTCACCAACAACCCCAAAAGGAATGATTTTTGTTCCAAATTTAGATGCGGTCCTTACAAACTCTGAATGTTCTGGCCAAAACAACTTGTATACTTCACCCTGTAGAAATGTGTCATTCTATGTAACGCTTCAAAGTTAAAACGAAGGCCAAATATGAGATATCTAATCATTACCTTTCTGTGCAAAGCTTCACGGACACCTCCAGGATACAAAACCACATGAGCCTTTGAGCGAAGTAGTTTATAGAAATTGATATTTGAGACAGGAACTGCGCCTATCATCCTAACTGAGTCGAACATATGCATATCAGGGAGTTTTGAGCCATATTTTTTGGCAAACATCACTGGATGTGCAAGTCCTCGCAACAGAATGTTCTTTTCTTTCAGGAAATGAATTGCTGCTGGACGCAATTCGGTACCAAGCAACATGTGATTGCCAACATAGAGAACCGGTCCCTCTGAAGGTATTCCCGCAAGTGATCTTACTACTGTACCGTTATCTAGAGTTGAGAGAAAGACTGGGGAGGTTATAGCAGTTAGCAATCTGGACCAGAAAAATAATAACAGCACTTCAGTATTTGCTTACAGTAGCAGAAGGAAATATCCTATTCTAGCTAAGTAGTACTATACAAATATTTTCACTACATCTAAGTCAAGAAAGCGTATTACACAGAGGATATTCATTTTACCTTTGTGATTCTTCATACTCTTTGAGCTCAAATGGGGTAGGCAGAATGAAATCAGAAACGTAATCAAGCAATTTTCCACGGCGATAATAATAAGTACACTTGATGATAGTCACCAGATCTACCCCATCCTCCTGACATGACATAAAATTATCAATCTGAAAGTTTGCTGAGCTAACTACTAGTTATAAACAGATACAAGAAAAACTTTCTTACATCAGGAAAAAGAGCACCTTACCAAAAAGAGAAGCTGTCCGTAATTCTCGAACTTACGGACTTCACAATTCGGCAATGTACAATGGAGTTTCTCAATGTCTTCCTTGTTTAGTAACCACTGATCGCGTCCACTGCAATATACAGTCTTATTAAAGCTACAACTCAGCTGCCAGCTAAGAAATTTTTTGACGAAAAAAGAGATCGCTGAACTTCTACTTATTGAAGCAGGGAAGTTTACAAGTTTATTAACCTCAAAAGTATAAGTGTTTGGGCTTTGACTGTGTACATGTGAGACTTAGCAGATGCTGAAGCAGACTTAAGCAGTTGAAGCTTCCATAGAAGTGTGTCCTTTGGAAAGATCCTAGCCAGAGTCTGTAAGAAATTTGTTTTCGTGAGTTAATCACATGAAAACATAGCTGAAACAACAAAATGAAGAACAAACAAGAGCACATTACTAGTTTAACTCTATAATCAGCAAGACAAACATGCATCTATCATTTGCTTTTCTAAAACAAAGTCTTACCGGCAGGTTAACTGAAGTTGCAAAGAGGTCTCCTAATAGCCCTCCACCGATCTGTGCGGCATCAGTTTCATTCAGCATAGTCTCGAACATTGCTGCAAACGGATAACCTATATAATAGGAACACAGTTAGCTGTGATTTGAACCAAATCCTGACACTGGAAACCCATCTTGGAGATCGAATAAATAAAGAAGTCTCTGCATCTCATTTGTCTTCGACTGGAAGATATACAAGGAGTTGAAAGTTCACCTTGTTCAAACCGAAAATTCTCCTCCAGGAAGCTGGGAACTCCGTCTGGCAAAATTTCCAATAGACTCGATAAAGGTTGCAACATGAAGTTGTTGACACGTGTGACTGCAACAAACAAAACGACACGCTTAAATCATAAAGTACGTAATTTTCTCATGACACATATTTGAGCTTGAACCATCGTTCTTACATAACTTTGGCCTAGAATATCTAGAGAAACACAATAAAGGATCTCAATGATCCAGAAAAAACGAGTCTTGCTTTACCTGGATTAGCTAGAATCAAGACAAGATCAATGTCAGGGTTACTGGCTGCAACATCTAGAGCAAGACAAGCTCCAATAGATTCTCCAACTATGTATATGGGTCTCTTTGGTAAACGGAAGTACTCTGACCTAACTGTTCTCTCAATGAGCTTCACAAGATCTGAAAACAACAGCAAGAGTTTCATCCACATAACATTAATCCATTTGGTTTGGGATCCGTACTGAAACAACAGAGAATGCTGACAAAGAAGCACCTCGAGCAGGGGTACGATCAGTGACTGGAAAGTGAAGGCACCATATGTCAAATATCCTATGATCAAAAAGATAATGAGATCGTAAACAAAGAGTATTCAGTAGATTCCTTCTTCTTTTGAAGTCATTTTGTACTACTTATTGATAAATCGAAGTTTTTTAAACATTGAAACAGGACCTGTGCACAATGGAGAGCTTATCTTAGGCTCTAAGGTAATAAAGAAGATTGAATCAAACAAGACTTACTCTCCAAGCCTCTTATGCTGGCGAATGAGCCCTAATCCAGTACCATCGATCC