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BaseInfo

ncRNA ID novel_gar_miR537
Species Gossypium arboreum
Class miRNA
Genome position Chr1:81721774-81721814 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 20
Mature sequence(if miRNA) 1 - UCAAGUGGCUGAAGGCCUUA - 20
Stem-loop(if miRNA) --U     A  -       UA
   GGCUU UA UCACUUG  A
   ||||| || |||||||
   CCGGA GU GGUGAAC  G
AUU     A  C       UC
Stem-loop sequence UGGCUUAUAUCACUUGUAAGCUCAAGUGGCUGAAGGCCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017773025.1
ncRNA:20   AUUCCGGAAGUCGGUGAACU   1
  *||||=|||||||*||||||
targets:2146   AAAGGUCUUCAGCAACUUGA   2165

2.5 PREDICTED: Gossypium arboreum uncharacterized LOC108471400 (LOC108471400), mRNA uncharacterized LOC108471400(LOC108471400) coding protein psRNATarget