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BaseInfo

ncRNA ID novel_gar_miR535
Species Gossypium arboreum
Class miRNA
Genome position Chr10:55141249-55141433 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 24
Mature sequence(if miRNA) 162 - UGGAUCGUGCUUUGGAUCUGCAGC - 185
Stem-loop(if miRNA) --                 C       A UG              A       C      A              C  -----U  U    GG C
  UGGAUCGUGCUUUGGAU UGCAGCC U  UUAGAGUACAUACA UGGUACU UGAGAU GGGAAACCAUAUUU UU      GG GGAC  U G
  ||||||||||||||||| ||||||| |  |||||||||||||| ||||||| |||||| |||||||||||||| ||      || ||||  | A
  ACCUAGCACGAAACCUA ACGUCGG A  AAUCUCAUGUAUGU ACCAUGA ACUUUA CCCUUUGGUAUAAA AG      CC CCUG  G U
CU                 A       G GU              C       A      C              C  UACAUU  -    AU G
Stem-loop sequence UGGAUCGUGCUUUGGAUCUGCAGCCAUUGUUAGAGUACAUACAAUGGUACUCUGAGAUAGGGAAACCAUAUUUCUUUGGUGGACGGUCGAUGGUAGUCCCCUUACAUGACAAAUAUGGUUUCCCCAUUUCAAAGUACCACUGUAUGUACUCUAAUGAGGGCUGCAAAUCCAAAGCACGAUCCAUC