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BaseInfo

ncRNA ID ath_circ_027456
Species Arabidopsis thaliana
Class circRNA
Genome position 5:16241877-16242312[+]
Reference genome TAIR10
Source PlantcircBase
Method find_circ
Type exonic
Splice junction sequence CGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGGTACACACAAGTTACTTTAATCTGATTTATGCAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGA
Tissues leaf
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence CGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGGTACACACAAGTTACTTTAATTGAACTGTAATGTTATTCTCTGGCAAAGACTTATGCTTGTAATGTTAATCACATAAGTGGTGGCAGAAGGTAATGATCAGAAGAGGAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAACAGGTAATCTTTCTTATAATGCACCTGCTTTCGATATTGCGATCAGTTCCATTCTCACAATGTCTGATTTATGCAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGA