ncRNA ID | ath_circ_027409 |
Species | Arabidopsis thaliana |
Class | circRNA |
Genome position | 5:16085999-16086374[+] |
Reference genome | TAIR10 |
Source | PlantcircBase |
Method | SMALT and Segemehl |
Type | exonic |
Splice junction sequence | ATCTTGAAAATTGAGATCTTGGAGTTGTTTGTTTCTAAGTGACCTAAATCTTACAAGATGTCTTGGGTTCGATTCACAATTGAGCAAAAAGATGGGAACTTCTGCTACTGCTTCTTCAAGGTCTAATAGATTCCCAGAGATCTCAACTAGTGATGCTCTTCAAAGACAGCTTCAACAGCTTTTTCATTTGAATGATTCTG |
Tissues | siliques and seeds |
Exon boundary | No-No |
Splicing signals | AG-GT |
circRNA sequence | NA |
Genomic sequence | ATCTTGAAAATTGAGATCTTGGAGTTGTTTGTTTCTAAGTGACCTAAATCTTACAAGATGTCTTGGGTTCGATTCACAATTGAGCAAAAAGATGGGAACTTTGCGTACCCACCACCGTTTTACAAAGACCCAATTCTTTCTCCGCCGTCTCCTCCACCACCGTCGTCCGGTAACAGAATCAGTCCGGCGGTTTTGTTTGTAATTGTGATTCTAGCTGTCTTGTTCTTCATTTCTGGGCTTCTTCATTTGCTCGTCAGGTTTCTTATTAAGCATCCTTCTGCTACTGCTTCTTCAAGGTCTAATAGATTCCCAGAGATCTCAACTAGTGATGCTCTTCAAAGACAGCTTCAACAGCTTTTTCATTTGAATGATTCTG |