| ncRNA ID | novel_gar_miR529 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:86641296-86641465 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAGGACUAGUUUGCUCUUUGAUC - 24 |
| Stem-loop(if miRNA) |
--UA -C AGG --------- ---ACU C A A AAAGAGUAAACUAGUCCUU UAUUAAAA UCAUCCAUUUUUAUUGUUAAAAA CUGAU UUCA GUU AC U ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||| ||| || G UUUCUCGUUUGAUCAGGAA AUAAUUUU AGUAGGUAAAAAUGACAAUUUUU GACUA AGGU CAG UG A CUAG AA AAA AACCGCACC CUUUAU A A G |
| Stem-loop sequence | UAAAAGAGUAAACUAGUCCUUCUAUUAAAAAGGUCAUCCAUUUUUAUUGUUAAAAACUGAUACUUUCACGUUAACAUGAGGUAGACAUGGAUAUUUCAUCAGCCACGCCAAUUUUUAACAGUAAAAAUGGAUGAAAAUUUUAAUAAAAAGGACUAGUUUGCUCUUUGAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752094.1 |
|
2.5 | PREDICTED: Gossypium arboreum universal stress protein PHOS32-like (LOC108453792), transcript variant X3, mRNA | universal stress protein PHOS32-like(LOC108453792) | coding protein | psRNATarget |