Search result

BaseInfo

ncRNA ID ath_circ_027396
Species Arabidopsis thaliana
Class circRNA
Genome position 5:15903779-15904555[+]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence GTGTTTGTGAAGTCCTCCAAATCGAATGCTTACTTCAAGAGGTACCAAGTGAAGTTCAGGAGAAGGAGAGGTATTGATCTGTTGTTACTGTCAAGCTAGATTCTGTGGAACCAACTGATTCCAGAAGACCTTTCCGTGCTCTTCTTGATGTTGGACTTATCAGGACTACCACTGGAAACCGTGTGTTTGGTGCACTCAAG
Tissues root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence GTGTTTGTGAAGTCCTCCAAATCGAATGCTTACTTCAAGAGGTACCAAGTGAAGTTCAGGAGAAGGAGAGGTATTGATCTGTTGTTACTGTCAAGCTAGACTTCGCTTTTTGGTCTGTTATATAGAGTTTATATGGGATTAGGTGTTGTGACCTGAAAGTTGTTGTTCTTATAATCTGTAGATGGGAAGACTGATTACAGGGCAAGGATCCGTCTTATCAATCAAGACAAGAACAAGTACAACACCCCTAAGTACCGTTTTGTTGTTCGATTTACCAACAAAGACATTGTGGCACAGATTGTATCTGCAAGCATAGCTGGTGACATTGTTAAAGCTTCGGCTTACGCACATGAGCTTCCTCAGTATGGACTCACTGTTGGTCTTACCAACTATGCTGCAGGTATTGAATCAGTTCTATACTTTTGTTTTCCCAATATTTGATTCTGTGTGTATGGTTTCTTAAAGACTTAATGTTTTTGTCATGCTAGCTTACTGTACTGGCCTTCTTTTGGCTCGTCGTGTTCTGAAAATGCTGGAAATGGATGATGAGTACGAGGGAAACGTAGAGGTATGTTGTGATCTTTTATTTCATCTTGAAAATAAAGAAACTTGAGAGTTTTCATCTTTTGATTAATAACTGAATCAAAATTGATGAATCAGGCCACTGGAGAGGACTTTTCTGTGGAACCAACTGATTCCAGAAGACCTTTCCGTGCTCTTCTTGATGTTGGACTTATCAGGACTACCACTGGAAACCGTGTGTTTGGTGCACTCAAG