ncRNA ID | novel_gar_miR525 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:92100562-92100640 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587;SRR1029586 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGGCUGUGGUUGAUUCGGCAAG - 22 |
Stem-loop(if miRNA) |
--C   -  U   U  U            UAUAUCUUGUC    GGC UG GGU GA UCGGCAAGAAAA           U    ||| || ||| || ||||||||||||           U    CCG AC CCA CU AGCCGUUCUUUU           U UAU   U  -   C  U            UAUUUUUAUUU |
Stem-loop sequence | CGGCUGUGGUUGAUUCGGCAAGAAAAUAUAUCUUGUCUUUUUUAUUUUUAUUUUUCUUGCCGAUUCCACCCAUGCCUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749243.1 |
|
0.0 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 15-like (LOC108451570), mRNA | zinc finger CCCH domain-containing protein 15-like(LOC108451570) | coding protein | psRNATarget |