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BaseInfo

ncRNA ID novel_gar_miR523
Species Gossypium arboreum
Class miRNA
Genome position Chr1:99535514-99535713 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 177 - AUGAAACUGUGAUUCUACGUCAUC - 200
Stem-loop(if miRNA) --              C  C       C   -       C    C             CAAAA       CC           A     AAU  GA      U
  AUGAAACUGUGAUU UA GUCAUCC UAU CUUUUUC AAUA GAGGAUGAUAAAU     UUUUCUU  UGAUUUUUAAC UUUUU   UG  UUUGAA U
  |||||||||||||| || ||||||| ||| ||||||| |||| |||||||||||||     |||||||  ||||||||||| |||||   ||  |||||| U
  UACUUUGACACUAA AU CAGUAGG AUA GGAAAAG UUAU CUCUUACUGUUUA     AAAAGGA  AUUAAAAAUUG AAAAA   AC  GGAUUU U
UA              A  A       A   A       -    C             UUCUA       AU           -     ---  -A      U
Stem-loop sequence AUGAAACUGUGAUUCUACGUCAUCCCUAUCUUUUUCCAAUACGAGGAUGAUAAAUCAAAAUUUUCUUCCUGAUUUUUAACAUUUUUAAUUGGAUUUGAAUUUUUUUUAGGACAAAAAAGUUAAAAAUUAUAAGGAAAAAUCUUAUUUGUCAUUCUCCUAUUGAAAAGGAAUAAGGAUGACAUAAAAUCACAGUUUCAUAU