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BaseInfo

ncRNA ID	novel_gar_miR520
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr13:74910185-74910264 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586;SRR1029588;SRR3180719;SRR3180720;SRR3180721;SRR1029587
Length	21
Mature sequence(if miRNA)	60 - GAUUUGGGGCAAAGACGGGAU - 80
Stem-loop(if miRNA)	--   A     U          U    AG -C  UG   A   CUC UCUUU CCCCAAAUCU UUUA  U  CA  AAC A   ||| ||||| |||||||||| ||||  |  ||  ||| C   GGG AGAAA GGGGUUUAGA AAAU  G  GU  UUG A UA   C     C          C    CU UU  GU   U
Stem-loop sequence	CUCAUCUUUUCCCCAAAUCUUUUUAAGUCCAUGAACAACAUGUUUGUGUUGUCUAAACAGAUUUGGGGCAAAGACGGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017772771.1	ncRNA:21   UAGGGCAGAAACGGGGUUUAG   1   ||||=|*|||||||||||||* targets:474   AUCCUGGCUUUGCCCCAAAUG   494 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum probable Histone-lysine N-methyltransferase ATXR5 (LOC108471168), transcript variant X3, mRNA	probable Histone-lysine N-methyltransferase ATXR5(LOC108471168)	coding protein	psRNATarget
XM_017772769.1	ncRNA:21   UAGGGCAGAAACGGGGUUUAG   1   ||||=|*|||||||||||||* targets:474   AUCCUGGCUUUGCCCCAAAUG   494 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum probable Histone-lysine N-methyltransferase ATXR5 (LOC108471168), transcript variant X1, mRNA	probable Histone-lysine N-methyltransferase ATXR5(LOC108471168)	coding protein	psRNATarget
XM_017772772.1	ncRNA:21   UAGGGCAGAAACGGGGUUUAG   1   ||||=|*|||||||||||||* targets:474   AUCCUGGCUUUGCCCCAAAUG   494 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum probable Histone-lysine N-methyltransferase ATXR5 (LOC108471168), transcript variant X4, mRNA	probable Histone-lysine N-methyltransferase ATXR5(LOC108471168)	coding protein	psRNATarget
XM_017772770.1	ncRNA:21   UAGGGCAGAAACGGGGUUUAG   1   ||||=|*|||||||||||||* targets:474   AUCCUGGCUUUGCCCCAAAUG   494 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum probable Histone-lysine N-methyltransferase ATXR5 (LOC108471168), transcript variant X2, mRNA	probable Histone-lysine N-methyltransferase ATXR5(LOC108471168)	coding protein	psRNATarget