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BaseInfo

ncRNA ID novel_gar_miR508
Species Gossypium arboreum
Class miRNA
Genome position Chr12:27985572-27985667 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 73 - GAGAAAGCUCUUGAAUAUUCGGUC - 96
Stem-loop(if miRNA) --     -     U        C  UCACUUGG     A      AAG   A
  GAGAA AGCUC UGAAUAUU GG        GGAAG AAAUUG   GUA G
  ||||| ||||| |||||||| ||        ||||| ||||||   |||
  UUCUU UUGAG ACUUGUAG UC        UCUUC UUUGAU   UAU U
AG     C     C        U  ------UA     G      -GG   U
Stem-loop sequence GAGAAAGCUCUUGAAUAUUCGGUCACUUGGGGAAGAAAAUUGAAGGUAAGUUUAUGGUAGUUUGCUUCUAUCUUGAUGUUCACGAGUUCUUCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788392.1
ncRNA:24   CUGGCUUAUAAGUUCUCGAAAGAG   1
  ||==*|=**|||||||||||||||
targets:322   GAUUCAGCUUUCAAGAGCUUUCUC   345

3.0 PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA dolichol kinase EVAN-like(LOC108484565) coding protein psRNATarget