ncRNA ID | novel_gar_miR508 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:27985572-27985667 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 73 - GAGAAAGCUCUUGAAUAUUCGGUC - 96 |
Stem-loop(if miRNA) |
--     -     U        C  UCACUUGG     A      AAG   A   GAGAA AGCUC UGAAUAUU GG        GGAAG AAAUUG   GUA G   ||||| ||||| |||||||| ||        ||||| ||||||   |||   UUCUU UUGAG ACUUGUAG UC        UCUUC UUUGAU   UAU U AG     C     C        U  ------UA     G      -GG   U |
Stem-loop sequence | GAGAAAGCUCUUGAAUAUUCGGUCACUUGGGGAAGAAAAUUGAAGGUAAGUUUAUGGUAGUUUGCUUCUAUCUUGAUGUUCACGAGUUCUUCUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788392.1 |
|
3.0 | PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA | dolichol kinase EVAN-like(LOC108484565) | coding protein | psRNATarget |